RetrogeneDB ID: | retro_tsyr_581 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_143143:6512..7250(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7L1 | ||
Ensembl ID: | ENSTSYG00000004848 | ||
Aliases: | None | ||
Description: | ribosomal protein L7-like 1 [Source:HGNC Symbol;Acc:21370] |
Percent Identity: | 95.93 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAEEGQRKIPLVPENLLKKRKAYQALKATQAKQALLARKEQRKGKGLKFKRLELFLYDSWRQKRDSVRLR |
MAEE.QRKIP..PENLLKKRKAYQALKATQAKQALLARKEQRKGKGLKFKRLELFLYDSW.QKRDSVRLR | |
Retrocopy | MAEEEQRKIPFIPENLLKKRKAYQALKATQAKQALLARKEQRKGKGLKFKRLELFLYDSW*QKRDSVRLR |
Parental | RLEVKPHALELPDKHSLAFVVRIQRIDGVSSLVQRTIARLHLKKIFSGVFVKVTPQRLKMLRIVETYVTC |
RLEVKPHALELPDKHSLAFVV.IQRIDGVSSLVQRTIARLHLKKIFSGVFVKVTPQ.LKMLRIVE.YVT. | |
Retrocopy | RLEVKPHALELPDKHSLAFVVHIQRIDGVSSLVQRTIARLHLKKIFSGVFVKVTPQNLKMLRIVEPYVTW |
Parental | GFPNLKSVRELILKRGQARVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLRPFQ |
GFPN.KSVRELILKRGQARVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLRPFQ | |
Retrocopy | GFPNPKSVRELILKRGQARVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLRPFQ |
Parental | LSVARHATKNRVGFVKEMGSPGYRGERINQLIRLLN |
.SVARHATKNRVGFVKEMGSPGYRGERINQLIRLLN | |
Retrocopy | FSVARHATKNRVGFVKEMGSPGYRGERINQLIRLLN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |