RetrogeneDB ID: | retro_amel_1260 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193120.1:735445..735846(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7L1 | ||
Ensembl ID: | ENSAMEG00000012791 | ||
Aliases: | None | ||
Description: | ribosomal protein L7-like 1 [Source:HGNC Symbol;Acc:21370] |
Percent Identity: | 64.71 % |
Parental protein coverage: | 54.25 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | MAEQEQRKKIPLVPE-NLLKKRKAYQALKATQAKQALLDKKEQKKGKQLKFKRLEWFLHDSWRQQRDRVR |
M.EQE.RK.IPLVPE.NL.KKRK.YQ..K.TQAKQALL.KKE..K.K....K.L.WFLHDSWRQQ.DRV. | |
Retrocopy | MTEQE*RKTIPLVPE>NL-KKRKPYQSFKTTQAKQALLEKKER*KRKGVRIK*LGWFLHDSWRQQHDRVH |
Parental | LRRLEVKPHGLEVPD-KHSLAFVVRIQRINGVSSLVQRTIARLRLKKIFSGVFFRVTPQTIKTLRV |
LR.L.V.P..L.V...KH.LAFV..IQRINGVS.LVQ.TIARL.LK.IF..V...V.P..IK.L.. | |
Retrocopy | LR*LKVQPYVLKVSG>KHPLAFVFCIQRINGVSLLVQGTIARLLLKNIFGSVCVKVIPLAIKMLHI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |