RetrogeneDB ID: | retro_chof_478 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_11326:19183..19565(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7L1 | ||
Ensembl ID: | ENSCHOG00000000306 | ||
Aliases: | None | ||
Description: | ribosomal protein L7-like 1 [Source:HGNC Symbol;Acc:21370] |
Percent Identity: | 74.62 % |
Parental protein coverage: | 52.03 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | IKGIGLLMRRTIERLRLRKIFSGVFVKMTPTTLKMLRTVEPYVTWGFPNLKSVR-ELILKRGQAKVKNKI |
IKGIGLL.RR..ERL.LRKIFS.VFVKMTPTTL.ML.T.EP.VTW.FPNLKSVR.ELILK.GQAKVK.KI | |
Retrocopy | IKGIGLLVRRATERLHLRKIFSRVFVKMTPTTLTMLHTMEPSVTWRFPNLKSVR<ELILKHGQAKVKKKI |
Parental | IPLTDNTVIEEHLGRFGVICLEDLIHEVAFPGK-YFDRISQFLCPFHLSVARHATKNKVG |
IP.TDNTVIEE.L.RFGVICL.DLIHEVAFPGK...DRISQFL.P..L.....A.....G | |
Retrocopy | IPSTDNTVIEEYLARFGVICLDDLIHEVAFPGK<VSDRISQFLWPVMLPRIKSAFLKEMG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |