Parental gene:

RPL7L1, ENSCHOG00000000306

Aliases:None
Description:ribosomal protein L7-like 1 [Source:HGNC Symbol;Acc:21370]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_4421:4897..8829(+)


>ENSCHOG00000000306
ATGGCAGAGGAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCAAAGGGATAGGTTTACTGATGCGGAGGACCAT
TGAAAGACTTCGCTTGAGGAAGATTTTCAGTGGTGTATTTGTGAAAATGACCCCCACAACCCTAAAAATGCTGCGTACAG
TGGAACCTTATGTGACGTGGGGATTTCCAAATCTGAAGTCTGTCAGGGAACTCATCCTGAAACGTGGACAAGCCAAGGTC
AAGAATAAGATAATCCCATTGACAGACAACACAGTAATTGAGGAGCACCTGGGGAGGTTTGGTGTTATTTGCTTGGAAGA
TCTCATTCATGAAGTTGCCTTCCCGGGGAAGTATTTTGACAGGATCTCCCAATTCTTGTGCCCATTCCATCTCTCAGTGG
CCCGTCACGCTACTAAGAATAAAGTGGGCTTTTTCAAGGAGATGGGCTCACCTGGTTATCGGGGCGAAAGCATCAATCAA
CTCATCCGACAGCTGAACTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012791 ortholog_one2one 2 retrogenes
Bos taurus ENSBTAG00000018478 ortholog_one2one 2 retrogenes
Canis familiaris ENSCAFG00000001728 ortholog_one2many 4 retrogenes
Cavia porcellus ENSCPOG00000021189 ortholog_one2many 2 retrogenes
Dasypus novemcinctus ENSDNOG00000013485 ortholog_one2one 1 retrogene
Equus caballus ENSECAG00000003113 ortholog_one2one 1 retrogene
Erinaceus europaeus ENSEEUG00000010431 ortholog_one2one 1 retrogene
Echinops telfairi ENSETEG00000002419 ortholog_one2one 3 retrogenes
Felis catus ENSFCAG00000009707 ortholog_one2one 1 retrogene
Homo sapiens ENSG00000146223 ortholog_one2one 22 retrogenes
Gorilla gorilla ENSGGOG00000009958 ortholog_one2many 15 retrogenes
Macaca mulatta ENSMMUG00000021313 ortholog_one2many 1 retrogene
Monodelphis domestica ENSMODG00000019028 ortholog_one2one 1 retrogene
Mustela putorius furo ENSMPUG00000013296 ortholog_one2one 1 retrogene
Mus musculus ENSMUSG00000063888 ortholog_one2many 4 retrogenes
Nomascus leucogenys ENSNLEG00000004649 ortholog_one2one 21 retrogenes
Oryctolagus cuniculus ENSOCUG00000003844 ortholog_one2one 6 retrogenes
Otolemur garnettii ENSOGAG00000012671 ortholog_one2many 3 retrogenes
Pongo abelii ENSPPYG00000016619 ortholog_one2one 21 retrogenes
Pan troglodytes ENSPTRG00000018175 ortholog_one2one 23 retrogenes
Pteropus vampyrus ENSPVAG00000008696 ortholog_one2one 3 retrogenes
Rattus norvegicus ENSRNOG00000016269 ortholog_one2many 1 retrogene
Sorex araneus ENSSARG00000005286 ortholog_one2one 2 retrogenes
Sarcophilus harrisii ENSSHAG00000011219 ortholog_one2one 1 retrogene
Sus scrofa ENSSSCG00000026472 ortholog_one2one 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000009841 ortholog_one2many 2 retrogenes
Tarsius syrichta ENSTSYG00000004848 ortholog_one2one 16 retrogenes
Tursiops truncatus ENSTTRG00000006971 ortholog_one2one 6 retrogenes
Vicugna pacos ENSVPAG00000008894 ortholog_one2one 2 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_388 78.36 54.47
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2. retro_chof_478 74.62 52.03
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3. retro_chof_1168 88.89 61.38
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4. retro_chof_1404 69.03 61.38
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Download FASTA sequences of all ENSCHOG00000000306 retrocopies