RetrogeneDB ID: | retro_mputfur_1577 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897271.1:265562..266282(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7L1 | ||
Ensembl ID: | ENSMPUG00000013296 | ||
Aliases: | None | ||
Description: | ribosomal protein L7-like 1 [Source:HGNC Symbol;Acc:21370] |
Percent Identity: | 72.87 % |
Parental protein coverage: | 99.19 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | EQEQRKKIPLVPENLLKKRKAYQALKATQAKQALLDKKEQKKGKQLKFKRLEWFLHDSWRQQRDRVRLRR |
.QEQR.KIPLVPENL.KK..AYQAL.A.QAKQALLDK.EQKKGK.L.FK...WFL..S..QQ.DR.RLRR | |
Retrocopy | QQEQR*KIPLVPENL-KKMMAYQALEASQAKQALLDK-EQKKGKELSFKGPKWFLYYSRWQQHDRLRLRR |
Parental | LEVKPRGLEVPDKHSLAFVVRIQRINGVSSLVQRTIARLRLKKIFSGVFFRVTPQTIKMLRIVEPYVAWG |
LE.KP.GLEVPDK.SL...V.IQR.NGVSSLVQRT.ARLR..KIFS.VFFRVTPQTIK.L..VE.Y...G | |
Retrocopy | LEGKPCGLEVPDKYSLGSAVCIQRMNGVSSLVQRTTARLR-PKIFSDVFFRVTPQTIKTLHTVETYMTRG |
Parental | FPNLKSVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKYGVICLEDLIHEIAFPGKNFQEISAFLRPFHL |
.PNLKS...LILK.GQ.KVKNKTIPLTDNTVI.EHLGK.GV.CLEDLI.EI.FPGKNFQ.ISAFL.PFHL | |
Retrocopy | LPNLKSAQKLILKHGQDKVKNKTIPLTDNTVIDEHLGK*GVTCLEDLIYEIVFPGKNFQ-ISAFLHPFHL |
Parental | SVARHTTKNRVGFLKEVGL-PGYRGE-RINQLIRQLN |
SVA...TKN..G.....GL.PG.RG...INQLI.QLN | |
Retrocopy | SVAYPATKNS-GLPQGGGL>PGSRGD<HINQLICQLN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |