RetrogeneDB ID: | retro_lafr_1216 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_9:35871667..35872051(+) | ||
Located in intron of: | ENSLAFG00000003106 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS23 | ||
Ensembl ID: | ENSLAFG00000031506 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.59 % |
Parental protein coverage: | 89.51 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | HRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFV |
H...QKWHDKQYKKA.LGTALKANPFG..SHAK..VLEK.GVEAKQP.SAIRKCVRVQLIKNGKKITAFV | |
Retrocopy | H*WNQKWHDKQYKKAYLGTALKANPFGDTSHAKRVVLEKEGVEAKQPDSAIRKCVRVQLIKNGKKITAFV |
Parental | PNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS |
PND.CLNFIEEN.E..V.G.GRKGHAVGDIPGV.FK.VKVAN.S..ALYKGKKERPRS | |
Retrocopy | PNDSCLNFIEENHEIQVVGSGRKGHAVGDIPGVHFKIVKVANISPSALYKGKKERPRS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |