RetrogeneDB ID: | retro_sara_422 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_200117:6364..6793(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS23 | ||
Ensembl ID: | ENSSARG00000008904 | ||
Aliases: | None | ||
Description: | ribosomal protein S23 [Source:HGNC Symbol;Acc:10410] |
Percent Identity: | 95.1 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | LGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFESASHAKGIVLEKVGVEAKQPNSAIRKCV |
.GKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKAN.F..A.HAKGIVLEKVGVEAKQPNSAIRKCV | |
Retrocopy | MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANLFGGAFHAKGIVLEKVGVEAKQPNSAIRKCV |
Parental | RVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKER |
RVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIP.V.FKVVKVANVSLLALYKGKKER | |
Retrocopy | RVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPRVLFKVVKVANVSLLALYKGKKER |
Parental | PRS |
PRS | |
Retrocopy | PRS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |