RetrogeneDB ID: | retro_tsyr_406 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_1113:38692..38991(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS23 | ||
Ensembl ID: | ENSTSYG00000011385 | ||
Aliases: | None | ||
Description: | ribosomal protein S23 [Source:HGNC Symbol;Acc:10410] |
Percent Identity: | 58.1 % |
Parental protein coverage: | 88.5 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 4 |
Parental | RKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKV-GVEAKQP-NSAIRKCVRVQLI-KN |
..L..H...Q.W.DKQYKKAHLGTALK..P.G.ASH.KGI.LEK..GV..K...NSAI.K...VQ...KN | |
Retrocopy | QQLCNH**EQRWNDKQYKKAHLGTALKVYPLGNASHTKGIMLEKE<GVKVKPS<NSAIWK*AMVQSNGKN |
Parental | GKKITAFVP-NDGCLNFIE-ENDEVLVAGFGRKGH |
.KKITAFVP...G.L.FIE...DE.L..GF...GH | |
Retrocopy | HKKITAFVP<SNGSLDFIE<RKDEALITGFSHEGH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |