RetrogeneDB ID: | retro_sara_648 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_252515:45005..45347(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS23 | ||
Ensembl ID: | ENSSARG00000008904 | ||
Aliases: | None | ||
Description: | ribosomal protein S23 [Source:HGNC Symbol;Acc:10410] |
Percent Identity: | 63.79 % |
Parental protein coverage: | 79.72 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | YKKAHLGTALKANPFESASHAKGIVLE-KVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIE |
YK.AHL.TALK.NP...ASHAKGIVLE.K.GVEAKQPNSA.R.C..VQL.KNGK....FVP..GCLNF.E | |
Retrocopy | YKNAHLSTALKTNPSGGASHAKGIVLE>KLGVEAKQPNSAVRQCAQVQLMKNGKIKLSFVPDYGCLNFTE |
Parental | ENDEVLVAGFGRKGHAVGDIPGVRFKVVK-VANVSLLALYKGKKER |
EN..VLVAGFG...HA.GD....R....K.VANVSLL.......ER | |
Retrocopy | ENNAVLVAGFGHRRHALGDTLQSRLSGFK<VANVSLLFGLTQRQER |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |