RetrogeneDB ID: | retro_mmur_872 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_116608:66..478(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS23 | ||
Ensembl ID: | ENSMICG00000013964 | ||
Aliases: | None | ||
Description: | ribosomal protein S23 [Source:HGNC Symbol;Acc:10410] |
Percent Identity: | 83.57 % |
Parental protein coverage: | 96.5 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | GLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLI |
GLRTARKL.SH.RDQKWHDKQYKK.HLGTAL.ANPFGGASHAKGI.LE.VGVEAKQPNSAIRKC.RVQLI | |
Retrocopy | GLRTARKLCSH*RDQKWHDKQYKKVHLGTAL*ANPFGGASHAKGIMLENVGVEAKQPNSAIRKCFRVQLI |
Parental | KNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY-KGKK-ERPRS |
KN.KKI.AFV.N.GCLNFIEEN.EVLVAGFG.KGHA.GDIPGVRFKVVKVANVS......K..K.ERPRS | |
Retrocopy | KNSKKIIAFVSNNGCLNFIEENNEVLVAGFG*KGHAIGDIPGVRFKVVKVANVSFGSIQ<KARK<ERPRS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |