Parental gene:

SNRPE, ENSAMEG00000000882

Aliases:None
Description:small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192583.1:381800..387632(+)


>ENSAMEG00000000882
ATGGCGTACCGTGGCCAGGGCCAAAAAGTGCAGAAGGTGATGGTTCAGCCCATCAACCTCATCTTCAGATACTTGCAAAA
TAGATCTCGAATTCAGGTGTGGCTTTATGAGCAAGTGAACATGCGGAAGGAGGGCTGTATCATTGGTTTTGATGAGTACA
TGAACCTCGTATTAGATGATGCTGAAGAGATTCATTCTAAAACAAAGTCAAGAAAACAGCTGGCAGGTCGGATCATGCTA
AAAGGAGATAATATTACCCTGCTCCAAAGTGTCTCCAAC

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006735 possible_ortholog 1 retrogene
retro_cjac_3163,
Dasypus novemcinctus ENSDNOG00000004490 possible_ortholog 24 retrogenes
retro_dnov_1009, retro_dnov_1141, retro_dnov_122, retro_dnov_1223, retro_dnov_1312, retro_dnov_1314, retro_dnov_1362, retro_dnov_1438, retro_dnov_163, retro_dnov_191, retro_dnov_2398, retro_dnov_2671, retro_dnov_360, retro_dnov_414, retro_dnov_513, retro_dnov_579, retro_dnov_796, retro_dnov_828, retro_dnov_898, retro_dnov_900, retro_dnov_902, retro_dnov_93, retro_dnov_967, retro_dnov_983,
Echinops telfairi ENSETEG00000014015 possible_ortholog 24 retrogenes
retro_etel_1136, retro_etel_1244, retro_etel_138, retro_etel_1443, retro_etel_1530, retro_etel_1636, retro_etel_1739, retro_etel_1781, retro_etel_1947, retro_etel_2143, retro_etel_234, retro_etel_258, retro_etel_310, retro_etel_377, retro_etel_466, retro_etel_546, retro_etel_56, retro_etel_579, retro_etel_581, retro_etel_582, retro_etel_76, retro_etel_776, retro_etel_799, retro_etel_80,
Gorilla gorilla ENSGGOG00000000755 possible_ortholog 7 retrogenes
retro_ggor_1462, retro_ggor_1626, retro_ggor_1700, retro_ggor_2221, retro_ggor_228, retro_ggor_2892, retro_ggor_91,
Myotis lucifugus ENSMLUG00000013244 ortholog_one2one 8 retrogenes
retro_mluc_1639, retro_mluc_1650, retro_mluc_1994, retro_mluc_2045, retro_mluc_2088, retro_mluc_2326, retro_mluc_85, retro_mluc_919,
Monodelphis domestica ENSMODG00000028394 ortholog_one2one 3 retrogenes
retro_mdom_1164, retro_mdom_1790, retro_mdom_1865,
Mustela putorius furo ENSMPUG00000011642 possible_ortholog 7 retrogenes
retro_mputfur_1078, retro_mputfur_1527, retro_mputfur_1634, retro_mputfur_53, retro_mputfur_638, retro_mputfur_729, retro_mputfur_949,
Mus musculus ENSMUSG00000090553 ortholog_one2one 10 retrogenes
retro_mmus_1527, retro_mmus_1597, retro_mmus_1704, retro_mmus_2090, retro_mmus_2788, retro_mmus_2953, retro_mmus_296, retro_mmus_3001, retro_mmus_3682, retro_mmus_898,
Pongo abelii ENSPPYG00000000326 possible_ortholog 8 retrogenes
retro_pabe_1375, retro_pabe_20, retro_pabe_2023, retro_pabe_228, retro_pabe_3015, retro_pabe_3620, retro_pabe_56, retro_pabe_610,
Sorex araneus ENSSARG00000003311 possible_ortholog 9 retrogenes
retro_sara_171, retro_sara_173, retro_sara_183, retro_sara_214, retro_sara_219, retro_sara_37, retro_sara_664, retro_sara_697, retro_sara_750,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_185 67.07 87.10
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2. retro_amel_412 86.52 95.70
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3. retro_amel_1112 68.82 97.85
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4. retro_amel_1206 57.95 93.55
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5. retro_amel_1211 71.11 95.70
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6. retro_amel_1293 77.01 93.55
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7. retro_amel_1517 77.66 100.00
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8. retro_amel_1530 95.70 100.00
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Download FASTA sequences of all ENSAMEG00000000882 retrocopies