RetrogeneDB ID: | retro_amel_1530 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193562.1:15122..15398(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPE | ||
Ensembl ID: | ENSAMEG00000000882 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161] |
Percent Identity: | 95.7 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRKEGCIIGFDEYMNLVLDDAEEIHSKTKS |
M.YRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMR.EGCIIGFDEYMNLVLDDAEEIHSKTKS | |
Retrocopy | MVYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKS |
Parental | RKQLAGRIMLKGDNITLLQSVSN |
RKQL.GRIMLKGDNITLLQS.SN | |
Retrocopy | RKQL-GRIMLKGDNITLLQSISN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |