RetrogeneDB ID: | retro_amel_1517 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193544.1:501618..501893(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPE | ||
Ensembl ID: | ENSAMEG00000000882 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161] |
Percent Identity: | 77.66 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRKEGCIIG-FDEYMNLVLDDAEEIHSKTK |
MA...QG.KVQ.VMVQPINLIFRYLQNR...QVWL.EQVN.R.EGCI.G.F.EY.N.VLDDAEEIHSKTK | |
Retrocopy | MACHSQGPKVQRVMVQPINLIFRYLQNRPQFQVWLCEQVNLRVEGCITG<FNEYVNPVLDDAEEIHSKTK |
Parental | SRKQLAGRIMLKGDNITLLQSVSN |
SRK.L.GRI.LKG.NITLLQ.VSN | |
Retrocopy | SRK-LLGRIGLKGNNITLLQNVSN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |