Parental gene: | Eif4e, ENSRNOG00000013183 |
| Aliases: | None |
| Description: | Eukaryotic translation initiation factor 4E [Source:UniProtKB/Swiss-Prot;Acc:P63074] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 2:262355380..262387511(+) |
>ENSRNOG00000013183
ATGGCGACTGTGGAACCGGAAACCACCCCTACCACTAATCCCCCACCTGCGGAAGAGGAAAAAACAGAGTCTAATCAGGA
GGTTGCTAATCCAGAGCACTATATTAAACACCCTCTACAGAACAGGTGGGCACTCTGGTTTTTTAAAAATGATAAAAGCA
AAACTTGGCAAGCAAACCTTCGGTTGATCTCTAAGTTTGATACTGTTGAAGACTTTTGGGCTCTATACAACCATATCCAG
TTGTCTAGTAATTTAATGCCTGGCTGTGACTACTCACTTTTTAAGGATGGTATTGAGCCTATGTGGGAAGATGAGAAAAA
CAAACGGGGAGGACGATGGCTAATTACATTGAACAAGCAGCAGAGACGAAGTGACCTCGATCGCTTTTGGCTAGAGACAC
TGCTGTGCCTTATTGGAGAATCTTTTGATGACTACAGTGATGACGTGTGTGGAGCTGTTGTCAATGTTAGAGCTAAAGGT
GATAAGATAGCAATATGGACGACTGAATGTGAAAACAGAGATGCAGTCACACACATAGGGAGGGTATACAAGGAAAGGTT
AGGACTTCCTCCGAAGATAGTGATTGGTTATCAGTCCCACGCAGACACAGCTACAAAGAGCGGCTCCACCACTAAAAATA
GGTTTGTTGTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 52 .84 RPM |
| SRP017611_kidney | 45 .15 RPM |
| SRP017611_liver | 19 .70 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000009450 | ortholog_one2one | 9 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007151 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000005383 | ortholog_one2one | 4 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000013712 | ortholog_one2one | 5 retrogenes | |
| Echinops telfairi | ENSETEG00000007347 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000151247 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000004718 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000011104 | ortholog_one2one | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000001482 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000005035 | possible_ortholog | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000011066 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000020716 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000002041 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000028156 | ortholog_one2one | 6 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000001456 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000001131 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014944 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000016301 | ortholog_one2one | 4 retrogenes | |
| Sorex araneus | ENSSARG00000007821 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000002230 | ortholog_one2one | 5 retrogenes | |
| Tarsius syrichta | ENSTSYG00000010862 | ortholog_one2one | 3 retrogenes | |
| Drosophila melanogaster | FBgn0035709 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_653 | 84.00 | 90.78 | Please wait, loading  |
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| 2. | retro_rnor_781 | 73.21 | 51.15 | Please wait, loading |
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| 3. | retro_rnor_783 | 84.09 | 100.00 | Please wait, loading |
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| 4. | retro_rnor_1437 | 79.61 | 68.20 | Please wait, loading |
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| 5. | retro_rnor_1534 | 80.92 | 79.26 | Please wait, loading |
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| 6. | retro_rnor_1544 | 97.25 | 100.00 | Please wait, loading |
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| 7. | retro_rnor_1545 | 97.25 | 100.00 | Please wait, loading |
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| 8. | retro_rnor_1853 | 80.18 | 99.54 | Please wait, loading |
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| 9. | retro_rnor_1854 | 80.18 | 99.54 | Please wait, loading |
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| 10. | retro_rnor_2017 | 67.18 | 59.45 | Please wait, loading |
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| 11. | retro_rnor_2159 | 65.73 | 64.52 | Please wait, loading |
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Download FASTA sequences of all ENSRNOG00000013183 retrocopies