RetrogeneDB ID: | retro_tsyr_2169 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_98762:7155..7495(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF4E | ||
Ensembl ID: | ENSTSYG00000010862 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:3287] |
Percent Identity: | 75.21 % |
Parental protein coverage: | 55.61 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | PTPNPPPTEEE-KTESNQDVAN-PEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYN |
P..N.PPT.EE....SNQ.VAN.PEH.IKH.LQNRW.LW.FKNDKSKTWQANL.LISK.DTVEDFW.LYN | |
Retrocopy | PWVNLPPT-EE>RKQSNQEVAN>PEHCIKHLLQNRWVLWCFKNDKSKTWQANLWLISKSDTVEDFWVLYN |
Parental | HIQLSSNLMPGCDYSLFKDGIEPMWEDEKNK-RGGRWLITLNKQQRR |
.IQLSSNLMPGCD.SLFK.GIE.MWEDEKNK..GG.WLITLN..... | |
Retrocopy | LIQLSSNLMPGCDHSLFKVGIETMWEDEKNK<SGGPWLITLNTAEMK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |