RetrogeneDB ID: | retro_tsyr_1077 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_29802:13523..13973(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF4E | ||
Ensembl ID: | ENSTSYG00000010862 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:3287] |
Percent Identity: | 80.67 % |
Parental protein coverage: | 72.68 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | WQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSD |
.QAN.RL.SKFDTVEDF..LYNHIQLSSNL.PGC.YSLFKDGI.PM.EDEKNK.GG.WLITLNKQQR... | |
Retrocopy | YQANPRLTSKFDTVEDF*PLYNHIQLSSNLIPGCNYSLFKDGIKPM*EDEKNKWGG*WLITLNKQQRQGN |
Parental | LDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYK-RLGLPPKIVI |
LDRFWLET.LCLIG..FDD.SDDVCGAV.NV..KGDKIAIW.TECE.RE.VT.IGRVYK.RLGL..KIVI | |
Retrocopy | LDRFWLETVLCLIG*PFDDRSDDVCGAVANVKGKGDKIAIWSTECETRETVTYIGRVYKERLGLTLKIVI |
Parental | GYQSHADTAT |
.YQSHADTAT | |
Retrocopy | FYQSHADTAT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |