Parental gene: | Eif4e, ENSMUSG00000028156 |
| Aliases: | Eif4e, EG668879, Eif4e-ps, If4e, eIF-4E |
| Description: | eukaryotic translation initiation factor 4E [Source:MGI Symbol;Acc:MGI:95305] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 3:138526190..138557599(+) |
>ENSMUSG00000028156
ATGGCGACTGTGGAACCGGAAACCACCCCTACCACTAATCCCCCACCTGCAGAAGAGGAAAAAACAGAGTCTAATCAGGA
GGTTGCTAACCCAGAGCACTATATTAAACACCCTCTACAGAACAGGTGGGCACTCTGGTTTTTTAAAAATGATAAAAGCA
AAACTTGGCAAGCAAACCTTCGATTGATCTCTAAGTTTGATACTGTTGAAGACTTTTGGGCTCTATACAACCATATCCAG
TTGTCTAGTAATTTAATGCCTGGCTGTGACTACTCACTTTTTAAGGACGGGATTGAGCCTATGTGGGAAGATGAGAAAAA
CAAACGAGGAGGACGGTGGCTGATCACACTGAACAAGCAGCAGAGACGGAGTGACCTCGATCGCTTCTGGCTAGAGACAC
TGCTGTGCCTTATTGGAGAATCTTTCGATGACTACAGTGATGATGTGTGTGGAGCTGTTGTTAATGTTAGAGCTAAAGGT
GATAAGATAGCAATATGGACTACTGAGTGTGAAAACAGAGATGCAGTCACACACATAGGGAGGGTATACAAGGAAAGGTT
AGGACTTCCTCCGAAGATAGTGATTGGTTATCAGTCCCACGCAGACACAGCTACAAAGAGCGGCTCCACCACTAAAAATA
GGTTTGTTGTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 55 .63 RPM |
| SRP007412_cerebellum | 43 .68 RPM |
| SRP007412_heart | 80 .47 RPM |
| SRP007412_kidney | 55 .05 RPM |
| SRP007412_liver | 25 .45 RPM |
| SRP007412_testis | 113 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000009450 | ortholog_one2one | 9 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007151 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000005383 | ortholog_one2one | 4 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000013712 | ortholog_one2one | 5 retrogenes | |
| Echinops telfairi | ENSETEG00000007347 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000151247 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000004718 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000011104 | ortholog_one2one | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000001482 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000005035 | possible_ortholog | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000011066 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000020716 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000002041 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000074895 | within_species_paralog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000001456 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000001131 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014944 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000016301 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000013183 | ortholog_one2one | 11 retrogenes | |
| Sorex araneus | ENSSARG00000007821 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000002230 | ortholog_one2one | 5 retrogenes | |
| Tarsius syrichta | ENSTSYG00000010862 | ortholog_one2one | 3 retrogenes | |
| Drosophila melanogaster | FBgn0035709 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_868 | 86.98 | 76.96 | Please wait, loading  |
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| 2. | retro_mmus_1059 | 89.81 | 71.89 | Please wait, loading |
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| 3. | retro_mmus_1478 | 81.58 | 52.53 | Please wait, loading |
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| 4. | retro_mmus_1872 | 60.61 | 58.06 | Please wait, loading |
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| 5. | retro_mmus_2362 | 64.63 | 65.90 | Please wait, loading |
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| 6. | retro_mmus_3462 | 97.74 | 61.29 | Please wait, loading |
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Download FASTA sequences of all ENSMUSG00000028156 retrocopies