RetrogeneDB ID: | retro_meug_2114 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold91875:1889..2409(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF4E | ||
Ensembl ID: | ENSMEUG00000011104 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:3287] |
Percent Identity: | 73.45 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 2 |
Parental | WALWFFK-NDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGG |
W.L.F.K.N.KSK..Q.NL.LISKFDTVED.WAL.NHIQLS.NLMPGCDYSLFKD.IEP..EDE..K... | |
Retrocopy | WVLFFEK<NEKSKI*QTNLHLISKFDTVEDLWAL*NHIQLSGNLMPGCDYSLFKDEIEPV*EDE*SKQE- |
Parental | RWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGK |
..LIT..KQQ..SD.D.FWLE.LLC.I..SF.DYSDD.CG..VN.RAKG.KIAIWTTECENR.AVTHIGK | |
Retrocopy | MMLITFKKQQK*SDFDHFWLERLLCFIRKSFEDYSDDLCGVIVNFRAKGNKIAIWTTECENREAVTHIGK |
Parental | VYKERLGLPPKIVIGYQSHADTATKSGST-TKNRFVV |
VYKERLG.PPK.VI.YQSHADTATKS.ST..KN.FV. | |
Retrocopy | VYKERLGFPPKVVISYQSHADTATKSEST<PKNSFVI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |