RetrogeneDB ID: | retro_sara_285 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_147532:1247..1626(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF4E | ||
Ensembl ID: | ENSSARG00000007821 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:3287] |
Percent Identity: | 87.6 % |
Parental protein coverage: | 60.19 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | ETTPTPNP-PPTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWAL |
ET...PNP.PPT..EKTESNQEV.NPE.YIKHPLQNRWALWFFK.D.SKTWQANL.LISKFDTVEDFWAL | |
Retrocopy | ETSLPPNP<PPTKGEKTESNQEVDNPENYIKHPLQNRWALWFFKSDESKTWQANL*LISKFDTVEDFWAL |
Parental | YNHIQLSSNLMPGCDYSL-FKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLET |
YNHIQLSSN.MPGCDYSL.FKDGIEPMWEDE.NK.GGRWLITLNKQQRRSDLD.FWLET | |
Retrocopy | YNHIQLSSNFMPGCDYSL<FKDGIEPMWEDEINK*GGRWLITLNKQQRRSDLDCFWLET |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |