Parental gene:

EIF4E, ENSCHOG00000009450

Aliases:None
Description:eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:3287]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_4696:4401..14400(-)


>ENSCHOG00000009450
TGGGCGCTTTGGTTTTTTAAAAATGATAAAAGCAAAACTTGGCAAGCAAACCTTCGACTGATCTCTAAATTTGATACTGT
TGAAGACTTTTGGGCTCTGTACAACCATATCCAGTTGTCTAGTAATTTAATGCCTGGCTGTGACTACTCACTTTTTAAGG
ATGGTATTGAGCCCATGTGGGAAGATGAAAAAAACAAAAGAGGAGGACGATGGCTAATTACATTGAACAAACAGCAGAGA
CGAAGTGACCTCGATCGCTTTTGGCTAGAGACACTGCTGTGCCTTATTGGATCTTTTGATGACTACAGTGATGATGTATG
TGGAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGAGGGTATACAAGGAAAGGTTAGGACTTCCTCCAAAGATAGTGATTGGTTATCAGTCCCATGCAGACACA
GCTACTAAGAGCGGCTCCACCACTAAAAATAGGTTTGTTGTTTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009522 ortholog_one2one 3 retrogenes
Canis familiaris ENSCAFG00000010307 ortholog_one2one 1 retrogene
Choloepus hoffmanni ENSCHOG00000013109 within_species_paralog 3 retrogenes
Callithrix jacchus ENSCJAG00000007151 ortholog_one2one 2 retrogenes
Cavia porcellus ENSCPOG00000005383 ortholog_one2one 4 retrogenes
Dasypus novemcinctus ENSDNOG00000013712 ortholog_one2one 5 retrogenes
Echinops telfairi ENSETEG00000007347 ortholog_one2one 3 retrogenes
Homo sapiens ENSG00000151247 ortholog_one2one 4 retrogenes
Gorilla gorilla ENSGGOG00000004718 ortholog_one2one 3 retrogenes
Macropus eugenii ENSMEUG00000011104 ortholog_one2one 3 retrogenes
Microcebus murinus ENSMICG00000001482 ortholog_one2one 1 retrogene
Myotis lucifugus ENSMLUG00000005035 ortholog_one2many 3 retrogenes
Macaca mulatta ENSMMUG00000011066 ortholog_one2one 2 retrogenes
Monodelphis domestica ENSMODG00000020716 ortholog_one2one 1 retrogene
Mustela putorius furo ENSMPUG00000002041 ortholog_one2many 1 retrogene
Mus musculus ENSMUSG00000028156 ortholog_one2one 6 retrogenes
Oryctolagus cuniculus ENSOCUG00000001456 ortholog_one2one 3 retrogenes
Otolemur garnettii ENSOGAG00000001131 ortholog_one2many 1 retrogene
Pongo abelii ENSPPYG00000014944 ortholog_one2one 3 retrogenes
Pan troglodytes ENSPTRG00000016301 ortholog_one2one 4 retrogenes
Rattus norvegicus ENSRNOG00000013183 ortholog_one2one 11 retrogenes
Sorex araneus ENSSARG00000007821 ortholog_one2one 1 retrogene
Ictidomys tridecemlineatus ENSSTOG00000002230 ortholog_one2one 5 retrogenes
Tarsius syrichta ENSTSYG00000010862 ortholog_one2one 3 retrogenes
Tursiops truncatus ENSTTRG00000004206 ortholog_one2one 2 retrogenes
Vicugna pacos ENSVPAG00000006072 ortholog_one2one 3 retrogenes
Drosophila melanogaster FBgn0035709 ortholog_one2many 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_124 88.29 62.64
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2. retro_chof_200 81.82 62.64
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3. retro_chof_604 99.09 62.64
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4. retro_chof_918 84.82 62.64
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5. retro_chof_992 95.45 62.64
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6. retro_chof_1177 96.36 62.64
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7. retro_chof_1219 98.18 62.64
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8. retro_chof_1319 77.48 62.64
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9. retro_chof_1551 92.73 62.64
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Download FASTA sequences of all ENSCHOG00000009450 retrocopies