RetrogeneDB ID: | retro_amel_1003 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192812.1:1059520..1060049(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000005805 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.37 % |
Parental protein coverage: | 66.91 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | ARGPK-KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI |
A.GPK...LK..AAP.HWMLDKLTGV....PS.GP.K.RECL.LII..RNRL.YALTG.EVKKIC.Q.FI | |
Retrocopy | AHGPK<EPLKHIAAPRHWMLDKLTGVL---PSSGPQKQRECLLLIISQRNRL*YALTGGEVKKICFQCFI |
Parental | KIDGKVRTDITY-PAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHL |
K.DGKV.T.ITY.PAG.MDVISIDKT..N..LI.DT.G.FAV.RITPEEA.YKLCKVRKIFVGT..IPHL | |
Retrocopy | KVDGKV*TGITY<PAGLMDVISIDKTEKNVHLIHDTQGCFAVRRITPEEAQYKLCKVRKIFVGTNEIPHL |
Parental | VTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLC |
V.H.A.TI.YPDPL.KVNDTIQIDLETGKI.DFIKFDTGNLC | |
Retrocopy | VSHRAHTICYPDPLVKVNDTIQIDLETGKIADFIKFDTGNLC |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |