RetrogeneDB ID: | retro_amel_195 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192350.1:4693821..4694228(-) | ||
Located in intron of: | ENSAMEG00000017948 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000005805 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 54.35 % |
Parental protein coverage: | 50.93 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | EVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLI-YDTKGRFAVHRITPEEAKYKLCKVRK |
.V...C...F...DGKV..DI....G.M.V.S.DKT..N..L..Y.T.....VH.ITPEE.KYKL.K.RK | |
Retrocopy | KVENSCIYQFTDTDGKVHIDINHSGGLMEVGSTDKTRDNLHLT<YNTQNCITVHDITPEETKYKLYKMRK |
Parental | IFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVIT |
I..GT..I..LV..DA.T...PD.LIK.N...QI.L.TGKITD.IKF..GNLCM..GGAN.G..GVIT | |
Retrocopy | IYSGTQEIYYLVMPDADTVHNPD-LIKQNKFNQIHLGTGKITDLIKFNNGNLCMGPGGANQGSTGVIT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |