RetrogeneDB ID: | retro_amel_971 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192782.1:867326..867926(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000005805 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64.56 % |
Parental protein coverage: | 75.46 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | ARGPKKHLKRVAAPKHWML-DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC-MQRF |
A.GPKK.LK.VAA.K...L...LT..FAP.PST.PHKL.EC.PL..F.RN..KYA.TGDE.KKI...Q.. | |
Retrocopy | AHGPKKNLKCVAALKQQRL<NNLTTMFAPCPSTSPHKLGECPPLS-FPRNTIKYAPTGDEMKKIS<IQQS |
Parental | IKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHL |
.KID.K..TDITYP.G..DV..ID.T.ENF.LIYD....FAVH.I.P.EAKYKLCKVRKIF.GTKGIPHL | |
Retrocopy | NKIDDKIQTDITYPTGLIDVTGIDNTEENFCLIYDPRS-FAVHYIIP*EAKYKLCKVRKIF*GTKGIPHL |
Parental | VTHDARTIRYPDP-LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS |
VTHDA.T...PDP.LIKV..TI..DLET..IT.FIKFDTG.L..VT..AN..R..VI...ER.PGS | |
Retrocopy | VTHDAHTSHRPDP<LIKVKETIHVDLETARITYFIKFDTGDLYIVTRSANMERTAVIIKKERYPGS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |