RetrogeneDB ID: | retro_amel_1869 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL195005.1:90384..91049(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000004407 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000005805 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.22 % |
Parental protein coverage: | 82.16 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | GPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRL-KYALTGDEVKKICMQRFIKI |
GPKKHLK.VAAPKH.MLDKLT.VFAP.PS.GPHKLR.CL.LIIFLRNRL..YALTG.EVKKICMQ.FIKI | |
Retrocopy | GPKKHLKCVAAPKHLMLDKLTSVFAPQPSAGPHKLRVCLHLIIFLRNRL<RYALTGVEVKKICMQCFIKI |
Parental | DGKVRTD---ITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHL |
DGKV.T.....TY.AGFMDVISIDKTGENF.LI.DTKG.FAVH.I..EEAKYKLCKVRK.FVGTKGIPHL | |
Retrocopy | DGKVQTYQNLLTYTAGFMDVISIDKTGENFYLIDDTKGCFAVHWIITEEAKYKLCKVRKNFVGTKGIPHL |
Parental | VTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVH |
V.HDA.T...PDPL..VNDTIQ.DLE.GKITDFI.FDTGNL......ANL.RIGVI..RER.PGS.D.VH | |
Retrocopy | VIHDAPTAHCPDPLTQVNDTIQTDLEIGKITDFIRFDTGNL--ISRRANLERIGVIISRERNPGSVDEVH |
Parental | VKDANGNSFATRLSN |
V.DANGNSFAT.LSN | |
Retrocopy | VEDANGNSFATQLSN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |