RetrogeneDB ID: | retro_ggor_2256 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 5:49012136..49012355(-) | ||
Located in intron of: | ENSGGOG00000004166 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSGGOG00000003241 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.56 % |
Parental protein coverage: | 70.19 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | KAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS |
..YHL.KSTCGKCGY.AKRKRKYNWSAKAKR.NTTGTG.MRHLKIVY.RFRHGF.E.T.PKPK.AA.AAS | |
Retrocopy | RTYHLEKSTCGKCGYAAKRKRKYNWSAKAKRQNTTGTGQMRHLKIVYSRFRHGFCERTPPKPKKAAAAAS |
Parental | SSS |
SSS | |
Retrocopy | SSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .00 RPM | 82 .53 RPM |
SRP007412_cerebellum | 0 .00 RPM | 113 .70 RPM |
SRP007412_heart | 0 .00 RPM | 51 .72 RPM |
SRP007412_kidney | 0 .00 RPM | 291 .86 RPM |
SRP007412_liver | 0 .00 RPM | 406 .30 RPM |
SRP007412_testis | 0 .00 RPM | 148 .25 RPM |