RetrogeneDB ID: | retro_ggor_1670 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 2a:27129057..27129300(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSGGOG00000003241 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.95 % |
Parental protein coverage: | 77.88 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | HTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPK |
HTLC..CG.KAYHLQK.TCGKCGY.AK..RKYNWSAKAKRRNTT.TG..RHLKI.Y.RFRHGF.EGTTPK | |
Retrocopy | HTLCSCCGCKAYHLQKLTCGKCGYLAKCERKYNWSAKAKRRNTTRTG*IRHLKIIYHRFRHGFHEGTTPK |
Parental | PKRAAVAASSS |
PKRAAVAASSS | |
Retrocopy | PKRAAVAASSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .00 RPM | 82 .53 RPM |
SRP007412_cerebellum | 0 .00 RPM | 113 .70 RPM |
SRP007412_heart | 0 .00 RPM | 51 .72 RPM |
SRP007412_kidney | 0 .00 RPM | 291 .86 RPM |
SRP007412_liver | 0 .03 RPM | 406 .30 RPM |
SRP007412_testis | 0 .10 RPM | 148 .25 RPM |
Species | RetrogeneDB ID |
---|---|
Homo sapiens | retro_hsap_2239 |
Pan troglodytes | retro_ptro_1584 |
Pongo abelii | retro_pabe_1967 |