RetrogeneDB ID: | retro_ggor_2909 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | X:55057334..55057622(+) | ||
Located in intron of: | ENSGGOG00000001504 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSGGOG00000003241 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.71 % |
Parental protein coverage: | 98.97 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIV |
.TKGTSSFGK...KTHTL.....S...H.QKS.CGKC.YP.K.K.KYNWSAKAKRRNTTG.G....LKIV | |
Retrocopy | VTKGTSSFGKPHIKTHTLRCCYSSNTCHFQKSMCGKCRYPPKHKIKYNWSAKAKRRNTTGIGVTSYLKIV |
Parental | YRRFRHGFREGTTPKPKRAAVAASSS |
...FRHG..EG.T.KPK.AAVAASSS | |
Retrocopy | HHEFRHGLCEGITHKPKGAAVAASSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .05 RPM | 82 .53 RPM |
SRP007412_cerebellum | 0 .04 RPM | 113 .70 RPM |
SRP007412_heart | 0 .00 RPM | 51 .72 RPM |
SRP007412_kidney | 0 .00 RPM | 291 .86 RPM |
SRP007412_liver | 0 .00 RPM | 406 .30 RPM |
SRP007412_testis | 0 .00 RPM | 148 .25 RPM |