RetrogeneDB ID: | retro_pcap_53 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | GeneScaffold_2813:175875..176152(-) | ||
Located in intron of: | ENSPCAG00000011880 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSPCAG00000007672 | ||
Aliases: | None | ||
Description: | ribosomal protein L37 [Source:HGNC Symbol;Acc:10347] |
Percent Identity: | 52.63 % |
Parental protein coverage: | 87.5 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 3 |
Parental | KQDDEGDVI-FWKA-NKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHL |
KQD.EG.VI.F.K...K.H.....C.S.AYHLQK..CGKCGYP.K.KR..N.S.K.KR.N.T.T..M... | |
Retrocopy | KQDVEGNVI>FGKSQSKIHI*YHQCDSRAYHLQKLACGKCGYPLKHKRNLN*SVKSKRWNITRTSQMSL* |
Parental | KIVYRRF-RHGFREGTT-PKPKRAA |
.....R..RH.F.E.TT..KPKRA. | |
Retrocopy | EVTWHRL<RHRFCERTT>AKPKRAS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |