RetrogeneDB ID: | retro_etel_1832 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_304660:21972..22288(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSETEG00000003463 | ||
Aliases: | None | ||
Description: | ribosomal protein L37 [Source:HGNC Symbol;Acc:10347] |
Percent Identity: | 78.3 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | LWSRPQKRDDE-GNVILRKA-NKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGT |
LWS.PQKRDDE.G...L.K....THTLCR.CGSKA.HLQK.TCGKCG.PAKRKR..NWSA.AKRRNTTGT | |
Retrocopy | LWSWPQKRDDE>GTSSLGKCRSQTHTLCRCCGSKACHLQKPTCGKCGCPAKRKRR*NWSATAKRRNTTGT |
Parental | GRMRHLKIVYRRFRHGFREGTTPKPKRAAVAASSSS |
GRMRHLKIV.RRFR.GF.EGTT.KPKRAA.AA.SSS | |
Retrocopy | GRMRHLKIVSRRFRRGFHEGTTTKPKRAAAAAPSSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |