RetrogeneDB ID: | retro_etel_132 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_2449:24702..25018(-) | ||
Located in intron of: | ENSETEG00000012720 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSETEG00000003463 | ||
Aliases: | None | ||
Description: | ribosomal protein L37 [Source:HGNC Symbol;Acc:10347] |
Percent Identity: | 77.78 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | LWSRPQKRDD-EGNVILRKA-NKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGT |
L.S..QKRDD..G....RK...K.HTLCRRCGSKAYHL..STCGKCG.PAKRKRKYNWSA.AKRRNTT.T | |
Retrocopy | LGSQLQKRDD>KGMSTFRKRRSKMHTLCRRCGSKAYHLLESTCGKCGCPAKRKRKYNWSATAKRRNTTDT |
Parental | GRMRHLKIVYRRFRHGF-REGTTPKPKRAAVAA-SSSS |
G.MRHLKIV.RR.RHGF.REGTTPKPKRAAV.A.SSSS | |
Retrocopy | GQMRHLKIVHRRLRHGF<REGTTPKPKRAAVTA>SSSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |