Parental gene:

RPL37, ENSAMEG00000015424

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192928.1:283834..285597(+)


>ENSAMEG00000015424
GACGAAGGGAACGTCATCCTTTGGAAAGCGAATAAGACGCACACGTTGTGCCGCCGCTGTGGCTCGAAGGCCTACCACCT
GCAGAAGTCCACCTGTGGCAAATGTGGCTATCCTGCCAAGCGCAAGAGAAAGTATAATTGGAGTGCCAAGGCGAAAAGAC
GAAACACCACTGGGACCGGGCGAATGAGGCATCTAAAAATTGTATACCGCAGATTCAGGCATGGATTCCGTGAAGGAACA
ACACCTAAGCCCAAGAGGGCAGCTGTTGCAGCATCCAGTTCATCT

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005142 possible_ortholog 6 retrogenes
retro_btau_1430, retro_btau_1502, retro_btau_1575, retro_btau_1670, retro_btau_181, retro_btau_243,
Callithrix jacchus ENSCJAG00000007388 possible_ortholog 10 retrogenes
retro_cjac_107, retro_cjac_1443, retro_cjac_169, retro_cjac_2091, retro_cjac_2443, retro_cjac_247, retro_cjac_2495, retro_cjac_2654, retro_cjac_2956, retro_cjac_332,
Equus caballus ENSECAG00000026905 ortholog_one2one 5 retrogenes
retro_ecab_323, retro_ecab_354, retro_ecab_411, retro_ecab_420, retro_ecab_896,
Echinops telfairi ENSETEG00000003463 ortholog_one2one 23 retrogenes
retro_etel_1003, retro_etel_1030, retro_etel_118, retro_etel_1195, retro_etel_1317, retro_etel_132, retro_etel_1414, retro_etel_1506, retro_etel_1664, retro_etel_1717, retro_etel_1832, retro_etel_1920, retro_etel_201, retro_etel_300, retro_etel_311, retro_etel_360, retro_etel_484, retro_etel_501, retro_etel_572, retro_etel_66, retro_etel_727, retro_etel_732, retro_etel_763,
Gorilla gorilla ENSGGOG00000003241 ortholog_one2one 19 retrogenes
retro_ggor_1002, retro_ggor_1100, retro_ggor_1452, retro_ggor_1488, retro_ggor_1558, retro_ggor_1643, retro_ggor_1670, retro_ggor_2025, retro_ggor_2169, retro_ggor_2246, retro_ggor_2256, retro_ggor_2436, retro_ggor_2629, retro_ggor_2660, retro_ggor_2909, retro_ggor_362, retro_ggor_490, retro_ggor_718, retro_ggor_769,
Latimeria chalumnae ENSLACG00000002787 possible_ortholog 1 retrogene
retro_lcha_6,
Macropus eugenii ENSMEUG00000011938 ortholog_one2one 3 retrogenes
retro_meug_1060, retro_meug_1633, retro_meug_255,
Macaca mulatta ENSMMUG00000023807 ortholog_one2one 6 retrogenes
retro_mmul_1602, retro_mmul_1672, retro_mmul_206, retro_mmul_329, retro_mmul_976, retro_mmul_997,
Monodelphis domestica ENSMODG00000020301 possible_ortholog 3 retrogenes
retro_mdom_130, retro_mdom_1843, retro_mdom_942,
Otolemur garnettii ENSOGAG00000034300 possible_ortholog 7 retrogenes
retro_ogar_127, retro_ogar_1308, retro_ogar_1662, retro_ogar_1667, retro_ogar_2670, retro_ogar_662, retro_ogar_76,
Procavia capensis ENSPCAG00000007672 ortholog_one2one 5 retrogenes
retro_pcap_252, retro_pcap_270, retro_pcap_349, retro_pcap_436, retro_pcap_53,
Pteropus vampyrus ENSPVAG00000000921 ortholog_one2one 8 retrogenes
retro_pvam_1048, retro_pvam_1070, retro_pvam_1478, retro_pvam_315, retro_pvam_49, retro_pvam_738, retro_pvam_803, retro_pvam_844,
Rattus norvegicus ENSRNOG00000012538 possible_ortholog 6 retrogenes
retro_rnor_171, retro_rnor_181, retro_rnor_220, retro_rnor_246, retro_rnor_321, retro_rnor_325,
Tarsius syrichta ENSTSYG00000006208 ortholog_one2one 21 retrogenes
retro_tsyr_1113, retro_tsyr_1206, retro_tsyr_144, retro_tsyr_1722, retro_tsyr_1893, retro_tsyr_1969, retro_tsyr_201, retro_tsyr_216, retro_tsyr_296, retro_tsyr_307, retro_tsyr_324, retro_tsyr_356, retro_tsyr_426, retro_tsyr_53, retro_tsyr_572, retro_tsyr_682, retro_tsyr_744, retro_tsyr_783, retro_tsyr_829, retro_tsyr_86, retro_tsyr_914,
Tursiops truncatus ENSTTRG00000010926 ortholog_one2one 7 retrogenes
retro_ttru_1712, retro_ttru_1905, retro_ttru_191, retro_ttru_242, retro_ttru_425, retro_ttru_828, retro_ttru_970,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_167 71.43 87.37
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2. retro_amel_181 72.73 91.58
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3. retro_amel_207 59.68 65.26
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4. retro_amel_237 85.88 89.47
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5. retro_amel_277 67.44 89.47
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6. retro_amel_701 70.73 85.26
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7. retro_amel_888 67.16 70.53
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8. retro_amel_910 82.76 91.58
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9. retro_amel_916 70.93 88.42
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10. retro_amel_1101 74.49 100.00
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11. retro_amel_1370 72.00 78.95
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12. retro_amel_1461 75.29 89.47
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13. retro_amel_1603 65.52 90.53
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14. retro_amel_1824 68.97 89.47
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Download FASTA sequences of all ENSAMEG00000015424 retrocopies