RetrogeneDB - Parental gene ENSCJAG00000007388 details

							
>ENSCJAG00000007388
ATGACGAAGGGAACGTCATCGTTTGGGAAGCGTCGTAATAAGACGCACACGTTGTGCCGCCGCTGCGGCTCTAAGGCCTA

CCACCTTCAGAAGTCGACCTGCGGCAAATGTGGCTACCCCGCCAAGCGCAAGAGAAAGTATAACTGGAGTGCCAAGGCTA

AAAGACGAAATACTACCGGGACTGGTCGAATGAGGCATCTAAAAATTGTATACCGCAGATTCAGGCATGGATTCCGTGAA

GGAACAACACCTAAACCCAAGAGGGCAGCTGTTGCAGCATCCAGTTCATCTTAA

Library	Parental gene expression (RPM)
SRP051959_spleen	117 .37 RPM
SRP051959_skeletal_muscle	83 .77 RPM
SRP051959_lymph_node	146 .30 RPM
SRP051959_lung	89 .99 RPM
SRP051959_liver	119 .20 RPM
SRP051959_kidney	67 .29 RPM
SRP051959_heart	63 .02 RPM
SRP051959_colon	80 .81 RPM

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000015424	possible_ortholog	14 retrogenes	retro_amel_1101, retro_amel_1370, retro_amel_1461, retro_amel_1603, retro_amel_167, retro_amel_181, retro_amel_1824, retro_amel_207, retro_amel_237, retro_amel_277, retro_amel_701, retro_amel_888, retro_amel_910, retro_amel_916,
Bos taurus	ENSBTAG00000005142	ortholog_one2one	6 retrogenes	retro_btau_1430, retro_btau_1502, retro_btau_1575, retro_btau_1670, retro_btau_181, retro_btau_243,
Equus caballus	ENSECAG00000026905	possible_ortholog	5 retrogenes	retro_ecab_323, retro_ecab_354, retro_ecab_411, retro_ecab_420, retro_ecab_896,
Echinops telfairi	ENSETEG00000003463	possible_ortholog	23 retrogenes	retro_etel_1003, retro_etel_1030, retro_etel_118, retro_etel_1195, retro_etel_1317, retro_etel_132, retro_etel_1414, retro_etel_1506, retro_etel_1664, retro_etel_1717, retro_etel_1832, retro_etel_1920, retro_etel_201, retro_etel_300, retro_etel_311, retro_etel_360, retro_etel_484, retro_etel_501, retro_etel_572, retro_etel_66, retro_etel_727, retro_etel_732, retro_etel_763,
Gorilla gorilla	ENSGGOG00000003241	possible_ortholog	19 retrogenes	retro_ggor_1002, retro_ggor_1100, retro_ggor_1452, retro_ggor_1488, retro_ggor_1558, retro_ggor_1643, retro_ggor_1670, retro_ggor_2025, retro_ggor_2169, retro_ggor_2246, retro_ggor_2256, retro_ggor_2436, retro_ggor_2629, retro_ggor_2660, retro_ggor_2909, retro_ggor_362, retro_ggor_490, retro_ggor_718, retro_ggor_769,
Latimeria chalumnae	ENSLACG00000002787	possible_ortholog	1 retrogene	retro_lcha_6,
Loxodonta africana	ENSLAFG00000030052	ortholog_one2many	13 retrogenes	retro_lafr_1101, retro_lafr_1123, retro_lafr_1125, retro_lafr_1136, retro_lafr_215, retro_lafr_374, retro_lafr_448, retro_lafr_507, retro_lafr_532, retro_lafr_619, retro_lafr_775, retro_lafr_985, retro_lafr_986,
Macropus eugenii	ENSMEUG00000011938	possible_ortholog	3 retrogenes	retro_meug_1060, retro_meug_1633, retro_meug_255,
Macaca mulatta	ENSMMUG00000023807	possible_ortholog	6 retrogenes	retro_mmul_1602, retro_mmul_1672, retro_mmul_206, retro_mmul_329, retro_mmul_976, retro_mmul_997,
Monodelphis domestica	ENSMODG00000020301	possible_ortholog	3 retrogenes	retro_mdom_130, retro_mdom_1843, retro_mdom_942,
Mus musculus	ENSMUSG00000041841	ortholog_one2one	28 retrogenes	retro_mmus_1333, retro_mmus_1360, retro_mmus_1425, retro_mmus_1560, retro_mmus_1717, retro_mmus_1732, retro_mmus_1804, retro_mmus_1813, retro_mmus_2067, retro_mmus_2379, retro_mmus_2385, retro_mmus_2513, retro_mmus_2559, retro_mmus_2575, retro_mmus_2691, retro_mmus_2811, retro_mmus_2838, retro_mmus_3090, retro_mmus_3222, retro_mmus_3343, retro_mmus_3345, retro_mmus_3364, retro_mmus_3455, retro_mmus_3493, retro_mmus_3503, retro_mmus_3504, retro_mmus_3674, retro_mmus_438,
Oryctolagus cuniculus	ENSOCUG00000029674	ortholog_one2one	11 retrogenes	retro_ocun_1063, retro_ocun_1269, retro_ocun_1476, retro_ocun_1491, retro_ocun_1514, retro_ocun_1870, retro_ocun_295, retro_ocun_683, retro_ocun_771, retro_ocun_879, retro_ocun_956,
Otolemur garnettii	ENSOGAG00000034300	possible_ortholog	7 retrogenes	retro_ogar_127, retro_ogar_1308, retro_ogar_1662, retro_ogar_1667, retro_ogar_2670, retro_ogar_662, retro_ogar_76,
Procavia capensis	ENSPCAG00000007672	possible_ortholog	5 retrogenes	retro_pcap_252, retro_pcap_270, retro_pcap_349, retro_pcap_436, retro_pcap_53,
Pteropus vampyrus	ENSPVAG00000000921	possible_ortholog	8 retrogenes	retro_pvam_1048, retro_pvam_1070, retro_pvam_1478, retro_pvam_315, retro_pvam_49, retro_pvam_738, retro_pvam_803, retro_pvam_844,
Rattus norvegicus	ENSRNOG00000012538	ortholog_one2many	6 retrogenes	retro_rnor_171, retro_rnor_181, retro_rnor_220, retro_rnor_246, retro_rnor_321, retro_rnor_325,
Sarcophilus harrisii	ENSSHAG00000013969	possible_ortholog	4 retrogenes	retro_shar_295, retro_shar_350, retro_shar_395, retro_shar_715,
Sus scrofa	ENSSSCG00000025883	ortholog_one2one	5 retrogenes	retro_sscr_1004, retro_sscr_1220, retro_sscr_1221, retro_sscr_767, retro_sscr_872,
Tarsius syrichta	ENSTSYG00000006208	possible_ortholog	21 retrogenes	retro_tsyr_1113, retro_tsyr_1206, retro_tsyr_144, retro_tsyr_1722, retro_tsyr_1893, retro_tsyr_1969, retro_tsyr_201, retro_tsyr_216, retro_tsyr_296, retro_tsyr_307, retro_tsyr_324, retro_tsyr_356, retro_tsyr_426, retro_tsyr_53, retro_tsyr_572, retro_tsyr_682, retro_tsyr_744, retro_tsyr_783, retro_tsyr_829, retro_tsyr_86, retro_tsyr_914,
Tursiops truncatus	ENSTTRG00000010926	possible_ortholog	7 retrogenes	retro_ttru_1712, retro_ttru_1905, retro_ttru_191, retro_ttru_242, retro_ttru_425, retro_ttru_828, retro_ttru_970,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_cjac_107	79.38	100.00	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_cjac_169	97.94	100.00	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_cjac_247	88.66	100.00	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_cjac_332	79.79	96.91	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_cjac_1443	96.94	100.00	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_cjac_2091	82.47	100.00	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_cjac_2443	94.85	100.00	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_cjac_2495	90.82	100.00	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_cjac_2654	67.35	100.00	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_cjac_2956	89.69	100.00	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSCJAG00000007388 retrocopies

Parental gene:	RPL37, ENSCJAG00000007388
Aliases:	None
Description:	ribosomal protein L37 [Source:HGNC Symbol;Acc:10347]
Organism:	*Marmoset (Callithrix jacchus)*
Coordinates:	2:162605647..162609507(+)

Parental gene:

RPL37, ENSCJAG00000007388