RetrogeneDB ID: | retro_etel_300 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_4957:183384..183699(+) | ||
Located in intron of: | ENSETEG00000014781 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSETEG00000003463 | ||
Aliases: | None | ||
Description: | ribosomal protein L37 [Source:HGNC Symbol;Acc:10347] |
Percent Identity: | 78.1 % |
Parental protein coverage: | 99.04 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | WSRPQKRDDEGNVILRKANK--THTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTG |
WS..QK.DDEGNVILRKA....THTL.R.CGSK..HLQKSTCGKC..P..RKRKYNW.AKAKR..TTGTG | |
Retrocopy | WSWLQK*DDEGNVILRKASQ*DTHTLYRCCGSKGCHLQKSTCGKCDAPVTRKRKYNWRAKAKRQSTTGTG |
Parental | RMRHLKIVYRRFRHGFREGTTPKPKRAAVAASSSS |
.MRHL.IVYRRFRHG.R.GTTPKPKRAAVAA.SSS | |
Retrocopy | *MRHLNIVYRRFRHGVRKGTTPKPKRAAVAAPSSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |