RetrogeneDB ID: | retro_lafr_80 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_30:6007822..6008311(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSLAFG00000026731 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SRSF3 | ||
Ensembl ID: | ENSLAFG00000018193 | ||
Aliases: | None | ||
Description: | serine/arginine-rich splicing factor 3 [Source:HGNC Symbol;Acc:10785] |
Percent Identity: | 93.9 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MHRDSCPLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT |
MH.DSCPLDCKVYVGNLG.NGNKTELE.AFGYYGPLRSVWVARN.PGFAFVEFEDPRDAADAVRELDGRT | |
Retrocopy | MHLDSCPLDCKVYVGNLGKNGNKTELEQAFGYYGPLRSVWVARNAPGFAFVEFEDPRDAADAVRELDGRT |
Parental | LCGCRVRVELSNGEKRSRNRGPPPSWGRRPRDDYRRRSPPPRRRSPRRRSFSRSRSRSLSRDRRRERSLS |
LCGC.VRVELSNGEKRSR.RGPPPSWGRRPRDDY..RSPPPRRRSPRRRSFSRSRSRSLS.DRRRERSLS | |
Retrocopy | LCGCCVRVELSNGEKRSRSRGPPPSWGRRPRDDY-LRSPPPRRRSPRRRSFSRSRSRSLSSDRRRERSLS |
Parental | RERNHKPSRSFSRSRSRSRSNERK |
RERNHKPSRSFSRS.SRSRSNERK | |
Retrocopy | RERNHKPSRSFSRSSSRSRSNERK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |