RetrogeneDB ID: | retro_ogar_1198 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873538.1:27450784..27451344(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FTH1 | ||
Ensembl ID: | ENSOGAG00000025354 | ||
Aliases: | None | ||
Description: | ferritin, heavy polypeptide 1 [Source:HGNC Symbol;Acc:3976] |
Percent Identity: | 79.79 % |
Parental protein coverage: | 80.79 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | STAAMTTASPSQVRQNYHQDSESGNISAASLE-HNTFMFPFQSYYFDRDDVALKNFAKYFLHQSHEEREH |
...AM.T.SPSQV.QNYHQD.E........LE.HN........YYFD.DDVAL.NFAKYFLHQSHEEREH | |
Retrocopy | TATAMMTVSPSQVCQNYHQDLEATINLQINLELHNSYVYLSMCYYFDHDDVALQNFAKYFLHQSHEEREH |
Parental | AEKLMKLQNQRGGRIFLQDI-KPDCDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIET |
AEKLMKLQNQ.G.RI.LQDI.KPDCDDWESGLNAMECALHLEKSVNQSLL.LHKLATDKNDPHLCDFI.T | |
Retrocopy | AEKLMKLQNQ*GSRILLQDIKKPDCDDWESGLNAMECALHLEKSVNQSLL*LHKLATDKNDPHLCDFIQT |
Parental | HYLHEQVKSIKELGDHVTNLRKMGAPESGMA-EYLFDKHTLGDSDNES |
..L.EQVKS.KELGDHVTNLRKMGAPESGMA.EY.FDKHTLGDSDNES | |
Retrocopy | RSLNEQVKSTKELGDHVTNLRKMGAPESGMA<EYPFDKHTLGDSDNES |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |