Parental gene:

FTH1, ENSGGOG00000027722

Aliases:None
Description:ferritin, heavy polypeptide 1 [Source:HGNC Symbol;Acc:3976]
Organism:Gorilla (Gorilla gorilla)
Coordinates:11:58731893..58735193(-)


>ENSGGOG00000027722
TCCTTAGTCGCCGCCATGACGACCGCGTCCACCTCGCAGGTGCGCCAGAACTACCACCAGGACTCAGAGGCCGCCATCAA
CCGCCAGATCAACCTGGAGCTCTACGCCTCCTACGTTTACCTGTCCATGTCTTACTACTTTGATCGCGATGATGTGGCTT
TGAAGAACTTTGCCAAATACTTTCTTCACCAATCTCATGAGGAGAGGGAACATGCTGAGAAACTGATGAAGCTGCAGAAC
CAACGAGGTGGCCGAATCTTCCTTCAGGATATCAAGAAACCAGACTGTGATGACTGGGAGAGCGGGCTGAATGCGATGGA
GTGCGCATTACATTTGGAAAAGAATGTGAATCAGTCACTACTGGAACTGCACAAACTGGCCACTGACAAAAATGACCCCC
ATTTGTGTGACTTCATTGAGACACATTACCTGAATGAGCAGGTGAAAGCCATCAAAGAATTGGGTGACCACGTGACCAAC
TTGCGCAAGATGGGAGCGCCCGAATCTGGCTTGGCAGAATATCTCTTTGACAAGCACACCCTGGGAGACAGTGATAATGA
AAGCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 580 .48 RPM
SRP007412_cerebellum 282 .76 RPM
SRP007412_heart 266 .20 RPM
SRP007412_kidney 1457 .48 RPM
SRP007412_liver 854 .86 RPM
SRP007412_testis 517 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016831 possible_ortholog 1 retrogene
Bos taurus ENSBTAG00000011184 possible_ortholog 10 retrogenes
Canis familiaris ENSCAFG00000015901 possible_ortholog 1 retrogene
Callithrix jacchus ENSCJAG00000019089 ortholog_many2many 16 retrogenes
Cavia porcellus ENSCPOG00000026586 possible_ortholog 3 retrogenes
Dasypus novemcinctus ENSDNOG00000017128 possible_ortholog 83 retrogenes
Felis catus ENSFCAG00000007382 possible_ortholog 1 retrogene
Gorilla gorilla ENSGGOG00000011999 other_paralog 9 retrogenes
Latimeria chalumnae ENSLACG00000017426 ortholog_one2many 1 retrogene
Loxodonta africana ENSLAFG00000004824 possible_ortholog 12 retrogenes
Microcebus murinus ENSMICG00000005851 possible_ortholog 6 retrogenes
Myotis lucifugus ENSMLUG00000025726 possible_ortholog 16 retrogenes
Monodelphis domestica ENSMODG00000007582 ortholog_many2many 9 retrogenes
Mustela putorius furo ENSMPUG00000014030 possible_ortholog 3 retrogenes
Mus musculus ENSMUSG00000024661 ortholog_one2many 4 retrogenes
Nomascus leucogenys ENSNLEG00000003321 ortholog_one2one 29 retrogenes
Oryctolagus cuniculus ENSOCUG00000014108 possible_ortholog 4 retrogenes
Otolemur garnettii ENSOGAG00000025354 possible_ortholog 9 retrogenes
Ochotona princeps ENSOPRG00000010734 possible_ortholog 7 retrogenes
Procavia capensis ENSPCAG00000010377 ortholog_one2many 13 retrogenes
Pteropus vampyrus ENSPVAG00000013038 possible_ortholog 3 retrogenes
Rattus norvegicus ENSRNOG00000022619 ortholog_one2many 9 retrogenes
Sus scrofa ENSSSCG00000014540 possible_ortholog 9 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000014521 possible_ortholog 1 retrogene
Vicugna pacos ENSVPAG00000003956 possible_ortholog 6 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_64 98.91 97.34
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2. retro_ggor_153 81.11 95.74
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3. retro_ggor_726 94.15 100.00
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4. retro_ggor_1313 96.30 100.00
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5. retro_ggor_1671 85.59 56.91
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6. retro_ggor_1858 93.12 100.00
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7. retro_ggor_2835 93.65 100.00
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Download FASTA sequences of all ENSGGOG00000027722 retrocopies