RetrogeneDB ID: | retro_ogar_1518 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873550.1:9415187..9415567(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FTH1 | ||
Ensembl ID: | ENSOGAG00000025354 | ||
Aliases: | None | ||
Description: | ferritin, heavy polypeptide 1 [Source:HGNC Symbol;Acc:3976] |
Percent Identity: | 67.97 % |
Parental protein coverage: | 55.02 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | LHQSHEEREHAEKLMKLQNQRGGRIFLQDIKP-DCDDWESGLNAMECALHLEKSVNQSLLELHKLATDKN |
LH.S.EEREHAEK.MKLQNQ.GG.IF...IK..D.DDW.S.LN.ME.ALHL.KSVNQS.L.LHKL..DK. | |
Retrocopy | LHRSQEEREHAEKWMKLQNQKGGQIFPLNIKKSDSDDWKSRLNSME*ALHLDKSVNQSVLTLHKLTVDKS |
Parental | DPHLCDFIETHYLHEQVKSIKELGDHVTNLRKMGA-PESGMAEYLFDKHTLGDSDNES |
DPHLC.FIE.HY..EQVKSI...GDHVTN..K.GA.P.SG.A..LFDKHTLGD..... | |
Retrocopy | DPHLCNFIEMHYQNEQVKSISKFGDHVTNCGKKGA<PQSGVADSLFDKHTLGDRESDN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |