Parental gene:

FTH1, ENSMICG00000005851

Aliases:None
Description:ferritin, heavy polypeptide 1 [Source:HGNC Symbol;Acc:3976]
Organism:Mouse Lemur (Microcebus murinus)
Coordinates:GeneScaffold_3374:56451..59070(-)


>ENSMICG00000005851
AGACGTTCTTCGCCGAGAGTCGCCGCGGTTTCCTGCTTCAACAGTGCTTGGACGGAACCCGGCGCTCGACCCCCACCCCG
GCCAGCCGCTCAGAGCCAGCCCTCCGCCACCTCCTCACCGCTCTTTCAGACCGCCCCAAGGCTCCTCTCCTCAGCCGCCG
CCATGACGACCGCGTCCACCTCGCAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTATTACTTTGACCGCGATGATGTGGCTTTGAAGAATTTTGC
CAAATACTTTCTTCACCAATCTCATGAGGAGAGGGAACATGCTGAGAAATTGATGAAGCTGCAGAACCAACGAGGTGGCC
GAATCTTCCTTCAGGACATCCAGAAACCAGACCATGATGATTGGGAGAACGGGCTGTATGCAATGGAGTGTGCATTACAC
TTGGAAAAAAGTGTGAATCAGTCACTACTGGAACTGCACAAACTGGCCACTGACAAAAATGACCCCCATTTGTGTGACTT
CCTTGAGACACATTACCTGAATGAGCAGGTGAAATCCATCAAAGAATTGGGTGACCACGTAACCAACCTGCGCAAGATGG
GAGCCCCTGAATCTGGCATGGCAGAGTATCTCTTTGACAAGCACACCCTGGGAGACAGTGATAACAGCTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016831 ortholog_one2many 1 retrogene
retro_amel_115,
Canis familiaris ENSCAFG00000015901 ortholog_one2many 1 retrogene
retro_cfam_150,
Callithrix jacchus ENSCJAG00000019089 possible_ortholog 16 retrogenes
retro_cjac_1570, retro_cjac_1634, retro_cjac_2115, retro_cjac_2233, retro_cjac_230, retro_cjac_232, retro_cjac_2320, retro_cjac_2531, retro_cjac_278, retro_cjac_2843, retro_cjac_2857, retro_cjac_485, retro_cjac_519, retro_cjac_699, retro_cjac_767, retro_cjac_804,
Cavia porcellus ENSCPOG00000026586 possible_ortholog 3 retrogenes
retro_cpor_1309, retro_cpor_15, retro_cpor_157,
Dasypus novemcinctus ENSDNOG00000017128 possible_ortholog 83 retrogenes
retro_dnov_1017, retro_dnov_1074, retro_dnov_1078, retro_dnov_110, retro_dnov_1179, retro_dnov_1188, retro_dnov_1196, retro_dnov_1201, retro_dnov_1205, retro_dnov_1271, retro_dnov_1352, retro_dnov_1356, retro_dnov_1369, retro_dnov_1397, retro_dnov_1415, retro_dnov_1425, retro_dnov_1446, retro_dnov_1489, retro_dnov_1526, retro_dnov_1535, retro_dnov_1554, retro_dnov_1565, retro_dnov_162, retro_dnov_1627, retro_dnov_1640, retro_dnov_1777, retro_dnov_1787, retro_dnov_1792, retro_dnov_1827, retro_dnov_1851, retro_dnov_1865, retro_dnov_1875, retro_dnov_189, retro_dnov_197, retro_dnov_2005, retro_dnov_2065, retro_dnov_2093, retro_dnov_2097, retro_dnov_2109, retro_dnov_2124, retro_dnov_2136, retro_dnov_2154, retro_dnov_2173, retro_dnov_220, retro_dnov_2216, retro_dnov_2231, retro_dnov_2241, retro_dnov_2251, retro_dnov_2356, retro_dnov_2388, retro_dnov_2399, retro_dnov_242, retro_dnov_2443, retro_dnov_2444, retro_dnov_2454, retro_dnov_2476, retro_dnov_2483, retro_dnov_2489, retro_dnov_2511, retro_dnov_2528, retro_dnov_2554, retro_dnov_2579, retro_dnov_2607, retro_dnov_2626, retro_dnov_2646, retro_dnov_304, retro_dnov_383, retro_dnov_409, retro_dnov_422, retro_dnov_471, retro_dnov_517, retro_dnov_52, retro_dnov_55, retro_dnov_589, retro_dnov_61, retro_dnov_661, retro_dnov_675, retro_dnov_722, retro_dnov_726, retro_dnov_810, retro_dnov_864, retro_dnov_890, retro_dnov_994,
Felis catus ENSFCAG00000007382 ortholog_one2one 1 retrogene
retro_fcat_887,
Gorilla gorilla ENSGGOG00000027722 possible_ortholog 7 retrogenes
retro_ggor_1313, retro_ggor_153, retro_ggor_1671, retro_ggor_1858, retro_ggor_2835, retro_ggor_64, retro_ggor_726,
Latimeria chalumnae ENSLACG00000017426 ortholog_one2many 1 retrogene
retro_lcha_75,
Loxodonta africana ENSLAFG00000004824 possible_ortholog 12 retrogenes
retro_lafr_106, retro_lafr_1080, retro_lafr_1129, retro_lafr_138, retro_lafr_321, retro_lafr_433, retro_lafr_523, retro_lafr_53, retro_lafr_624, retro_lafr_717, retro_lafr_760, retro_lafr_966,
Microcebus murinus ENSMICG00000001861 other_paralog 7 retrogenes
retro_mmur_1017, retro_mmur_1238, retro_mmur_1420, retro_mmur_1506, retro_mmur_204, retro_mmur_214, retro_mmur_681,
Myotis lucifugus ENSMLUG00000025726 ortholog_one2many 16 retrogenes
retro_mluc_1030, retro_mluc_1142, retro_mluc_1211, retro_mluc_1354, retro_mluc_1464, retro_mluc_1769, retro_mluc_1984, retro_mluc_2002, retro_mluc_2091, retro_mluc_212, retro_mluc_2635, retro_mluc_361, retro_mluc_532, retro_mluc_556, retro_mluc_850, retro_mluc_885,
Monodelphis domestica ENSMODG00000007582 possible_ortholog 9 retrogenes
retro_mdom_1134, retro_mdom_122, retro_mdom_1294, retro_mdom_1407, retro_mdom_1742, retro_mdom_300, retro_mdom_564, retro_mdom_643, retro_mdom_809,
Mustela putorius furo ENSMPUG00000014030 ortholog_one2one 3 retrogenes
retro_mputfur_1642, retro_mputfur_36, retro_mputfur_408,
Oryctolagus cuniculus ENSOCUG00000014108 possible_ortholog 4 retrogenes
retro_ocun_1172, retro_ocun_1179, retro_ocun_1598, retro_ocun_93,
Otolemur garnettii ENSOGAG00000025354 ortholog_one2one 9 retrogenes
retro_ogar_1065, retro_ogar_1198, retro_ogar_1518, retro_ogar_2010, retro_ogar_2099, retro_ogar_2349, retro_ogar_2661, retro_ogar_2747, retro_ogar_3380,
Pongo abelii ENSPPYG00000003173 possible_ortholog 12 retrogenes
retro_pabe_1034, retro_pabe_1186, retro_pabe_2410, retro_pabe_2483, retro_pabe_2484, retro_pabe_249, retro_pabe_3351, retro_pabe_3406, retro_pabe_35, retro_pabe_3713, retro_pabe_47, retro_pabe_479,
Pteropus vampyrus ENSPVAG00000013038 ortholog_one2one 3 retrogenes
retro_pvam_1006, retro_pvam_136, retro_pvam_5,
Sus scrofa ENSSSCG00000014540 possible_ortholog 9 retrogenes
retro_sscr_1045, retro_sscr_168, retro_sscr_286, retro_sscr_359, retro_sscr_498, retro_sscr_581, retro_sscr_78, retro_sscr_906, retro_sscr_949,
Ictidomys tridecemlineatus ENSSTOG00000014521 ortholog_one2one 1 retrogene
retro_itri_250,
Vicugna pacos ENSVPAG00000003956 ortholog_one2one 6 retrogenes
retro_vpac_233, retro_vpac_300, retro_vpac_370, retro_vpac_505, retro_vpac_515, retro_vpac_643,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmur_392 65.62 53.39
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2. retro_mmur_509 72.95 51.69
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3. retro_mmur_1227 74.42 53.81
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4. retro_mmur_1303 73.24 59.32
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5. retro_mmur_1370 89.86 58.47
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6. retro_mmur_1609 74.80 52.97
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Download FASTA sequences of all ENSMICG00000005851 retrocopies