RetrogeneDB ID: | retro_ogar_2099 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873590.1:8795922..8796375(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000030007 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FTH1 | ||
Ensembl ID: | ENSOGAG00000025354 | ||
Aliases: | None | ||
Description: | ferritin, heavy polypeptide 1 [Source:HGNC Symbol;Acc:3976] |
Percent Identity: | 67.1 % |
Parental protein coverage: | 65.94 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | TFMFPFQSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDI-KPD-CDDWESGLNA |
.F.....SY.FD.DDV.LKNF.KY.LHQSH.EREHA.KLMKLQNQ.GGRI.LQ.I.KPD..D.WES.LNA | |
Retrocopy | SFLYLSLSYFFDPDDVVLKNFVKYCLHQSHKEREHAKKLMKLQNQGGGRICLQEIKKPD<RDNWESRLNA |
Parental | MECALHLEKSVNQSLLELH-KLATDKNDPHLCDFIETHYLHEQVKSIKEL-GDHVTNLRKMGAPESGMAE |
M.CALHL.KS..QSLLELH..LATDKN.P.LCDFIE..YL.EQVKSIKEL.GD..........P.S.MAE | |
Retrocopy | MKCALHLGKSIAQSLLELH<QLATDKNNPCLCDFIEANYLNEQVKSIKEL<GDQ*PTCTRRTPPPSTMAE |
Parental | YLFDKHTLGDSDNES |
...D.HTL.DSD.ES | |
Retrocopy | CHSDIHTLPDSDTES |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |