Parental gene:

FTH1, ENSCPOG00000026586

Aliases:None
Description:ferritin heavy chain [Source:RefSeq peptide;Acc:NP_001166318]
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_65:9448202..9449937(+)


>ENSCPOG00000026586
ATGACGACCGCCTCGCCCTCGCAGGTGCGCCAGAACTACCACCAGGACGCCGAGGCCGCCATCAACCGCCAGATCAACCT
GGAGCTCTACGCCTCCTACGTCTACCTGTCCATGTCTTACTACTTTGACCGCGATGATGTGGCTTTGAAGAACTTCGCCA
AATACTTCCTTCACCAATCTCATGAGGAGAGGGAACATGCAGAGAAGCTGATGAAGCTGCAGAACCAGCGCGGTGGCCGG
ATCTTTCTTCAGGATATCAAGAAACCAGACCGTGATGACTGGGAGAATGGGCTGAATGCCATGGAGTGCGCCCTTCACTT
GGAGAAGAGTGTGAATCAGTCACTCCTGGAGCTGCACAAGCTGGCCACTGACAAGAATGACCCTCATCTGTGCGACTTCA
TCGAGACTCACTACCTGGATGAGCAGGTGAAGGCCATCAAAGAGCTGGGCGACCACGTGACCAACCTGCGCAAGATGGGT
GCCCCTGAGTCTGGCATGGCCGAGTATCTCTTTGACAAGCACACCCTGGGGGACAGTGACGAGAGCTAA

Library Parental gene expression (RPM)
SRP017611_liver 1936 .77 RPM
SRP017611_kidney 1695 .94 RPM
SRP017611_brain 963 .92 RPM
SRP040447_lung 2921 .18 RPM
SRP040447_skeletal_muscle 1262 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016831 possible_ortholog 1 retrogene
Bos taurus ENSBTAG00000011184 ortholog_one2one 10 retrogenes
Canis familiaris ENSCAFG00000015901 possible_ortholog 1 retrogene
Callithrix jacchus ENSCJAG00000019089 possible_ortholog 16 retrogenes
Cavia porcellus ENSCPOG00000020558 other_paralog 1 retrogene
Dasypus novemcinctus ENSDNOG00000017128 possible_ortholog 83 retrogenes
Felis catus ENSFCAG00000007382 possible_ortholog 1 retrogene
Homo sapiens ENSG00000167996 possible_ortholog 20 retrogenes
Gorilla gorilla ENSGGOG00000027722 possible_ortholog 7 retrogenes
Latimeria chalumnae ENSLACG00000017426 ortholog_one2many 1 retrogene
Loxodonta africana ENSLAFG00000004824 possible_ortholog 12 retrogenes
Microcebus murinus ENSMICG00000005851 possible_ortholog 6 retrogenes
Myotis lucifugus ENSMLUG00000025726 possible_ortholog 16 retrogenes
Monodelphis domestica ENSMODG00000007582 possible_ortholog 9 retrogenes
Mustela putorius furo ENSMPUG00000014030 possible_ortholog 3 retrogenes
Mus musculus ENSMUSG00000024661 possible_ortholog 4 retrogenes
Nomascus leucogenys ENSNLEG00000003321 possible_ortholog 29 retrogenes
Oryctolagus cuniculus ENSOCUG00000014108 possible_ortholog 4 retrogenes
Otolemur garnettii ENSOGAG00000025354 possible_ortholog 9 retrogenes
Ochotona princeps ENSOPRG00000010734 ortholog_one2one 7 retrogenes
Procavia capensis ENSPCAG00000010377 possible_ortholog 13 retrogenes
Pongo abelii ENSPPYG00000003173 possible_ortholog 12 retrogenes
Pteropus vampyrus ENSPVAG00000013038 possible_ortholog 3 retrogenes
Rattus norvegicus ENSRNOG00000022619 possible_ortholog 9 retrogenes
Sus scrofa ENSSSCG00000014540 ortholog_one2many 9 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000014521 possible_ortholog 1 retrogene
Vicugna pacos ENSVPAG00000003956 possible_ortholog 6 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_15 71.02 96.70
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2. retro_cpor_157 59.82 60.44
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3. retro_cpor_1309 52.03 65.93
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Download FASTA sequences of all ENSCPOG00000026586 retrocopies