RetrogeneDB ID: | retro_itri_250 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393281.1:31144894..31145306(+) | ||
Located in intron of: | ENSSTOG00000027069 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000014521 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 85.51 % |
Parental protein coverage: | 90.73 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | VALKNFAKYFLHQSQEEREHAEKLMKLQNQRGGRIF-LQDIKKPDRDDWESGLNAMECALHLEKSVNQSL |
VALKNFAK.FLHQS..EREHA.KLM.LQNQRGGRI..L.DIKKPD.DDWE.GL.AMECALHLEKSVNQSL | |
Retrocopy | VALKNFAKDFLHQSHKEREHAKKLMRLQNQRGGRIL>LKDIKKPDGDDWEGGLDAMECALHLEKSVNQSL |
Parental | LELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDKHTLGDSDNES |
LELHKLATDKNDPHLCDFIETHYLNEQ.KS.KELGD.VTNL.K.GAPESG.AE.LFDKHTLGD.D.ES | |
Retrocopy | LELHKLATDKNDPHLCDFIETHYLNEQEKSTKELGDCVTNLGKLGAPESGKAECLFDKHTLGDNDEES |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |