RetrogeneDB ID: | retro_mluc_1252 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429809:7759187..7760206(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000016303 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000013537 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.32 % |
Parental protein coverage: | 73.81 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 5 |
Parental | IEKFEKEAAEMG-KGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTS |
IE.F..EAAEMG.KG.FKYA.VLDK.KAE.E.G...DISLWKFETSKYYVTI.DAPGHRDFIKNM.TGTS | |
Retrocopy | IEIFDNEAAEMG<KGFFKYACVLDKPKAEHEGGSSFDISLWKFETSKYYVTITDAPGHRDFIKNMVTGTS |
Parental | QADC-AVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYS-QKRYEEIVKEVS |
QADC......A...GE.EAGISKNGQT.EHALLAYTLG.KQLI.GVN.MDSTEPPY..QKRY.EIVKEVS | |
Retrocopy | QADC>VLIVAA-DAGELEAGISKNGQTCEHALLAYTLGMKQLIIGVNTMDSTEPPYK>QKRYNEIVKEVS |
Parental | TYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGNASG-TTLLEALDCILPPTRPTDK |
TYIKK..YN..T.AFVP..GWNGDN.L.PSANM.WFKGWKV..KDGNA.G.T.LL.ALDCILP.TRP.DK | |
Retrocopy | TYIKKVSYNSNTAAFVPVPGWNGDNRLKPSANMLWFKGWKVPHKDGNANG<TRLLGALDCILPLTRPNDK |
Parental | PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKN |
.L.LPLQDV.KIG.IGTVPVGRVET.VLKPGMVVT.APVNVTTEVKSV.MHHEALSEALPGD.VGF.VK. | |
Retrocopy | SLCLPLQDVHKIGSIGTVPVGRVETSVLKPGMVVTLAPVNVTTEVKSVKMHHEALSEALPGDIVGFSVKH |
Parental | VSVKDVRRGNVAGDSK-NDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKI |
VSVKDV..GNVAGDSK.NDP..EA..FTAQVI.LNHPGQISAG.APVL.CHTAHIACKFA...... | |
Retrocopy | VSVKDVCHGNVAGDSK<NDPEVEAVSFTAQVITLNHPGQISAGHAPVLNCHTAHIACKFAVIIDTV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |