RetrogeneDB ID: | retro_mluc_1901 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429942:1066869..1068101(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000013537 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.85 % |
Parental protein coverage: | 89.39 % |
Number of stop codons detected: | 6 |
Number of frameshifts detected | 6 |
Parental | MGKEKTHINIVVIG-HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERER |
MGKEKTHINI.V.....DS.KSTTTGHLIYK.GGIDKRTIEKFEKEAAEMGKGSF.Y.WVLDK.KAE... | |
Retrocopy | MGKEKTHINIIVND<QIDSHKSTTTGHLIYKYGGIDKRTIEKFEKEAAEMGKGSFNYVWVLDKRKAEH*C |
Parental | GITIDISLWKFETSKYYVTIIDAPGHRDFIKN-MITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHAL |
GIT.DISL.KFETSKYY..I.DAPG.RDF.KN..ITGTSQADCAVLIVAAGVG.FEAGISKNGQT.EH.L | |
Retrocopy | GITNDISL*KFETSKYYMVITDAPGYRDFVKN>LITGTSQADCAVLIVAAGVGAFEAGISKNGQTHEHLL |
Parental | -LAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKI-GYNPDTVAFVPISGWNGDNMLEPSA |
.LA.TLGVKQLI.GVNK..STE..YS.K.Y..IVKEVSTY.KKI...NP.TV.FVP.S...G.NM.EPSA | |
Retrocopy | <LAHTLGVKQLIIGVNKIGSTELSYS*KGYKKIVKEVSTYLKKI<YLNPNTVTFVPMSD*KGNNMPEPSA |
Parental | NMPWFKGWKVTRKDGNASGTTLLEALDCILPPTR-PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG |
NMP.FKGWKV..KDGNASGTT.LE.LDC.LP.TR.P.DKP..LPLQDVYKIGG..TVPVG.VETGV.KPG | |
Retrocopy | NMPCFKGWKVPLKDGNASGTTQLEILDCNLPLTR<PSDKPC-LPLQDVYKIGGMSTVPVGTVETGVQKPG |
Parental | MVVT-FAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQV |
MVVT..AP..VT.EV.SVE.HHEALSEA.PGD.V.FNVKN.SVKDV.R.NVAGD.KNDPP..A.GFT.QV | |
Retrocopy | MVVT<YAPASVTIEVMSVEGHHEALSEAFPGDSVSFNVKNMSVKDVHRDNVAGDCKNDPPVDATGFTTQV |
Parental | IILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMIPGKPMCVE |
I.LNHPG.ISAG..PVLDCHTA..ACKF.E.KEKID..SGKKLE.GPKFLKS.D.AI.DM.PGKPMCVE | |
Retrocopy | IVLNHPG*ISAG*TPVLDCHTARVACKFVEPKEKIDGHSGKKLENGPKFLKSSDVAIIDMVPGKPMCVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |