RetrogeneDB ID: | retro_mluc_950 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429785:11703581..11704624(+) | ||
Located in intron of: | ENSMLUG00000006204 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000013537 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 82.72 % |
Parental protein coverage: | 75.32 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 5 |
Parental | DCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIK |
D.AVLIVAAGVGEFEAGISKNGQ.REHA..AYTLGVKQLIVGVNKMDSTE.P.SQ.R..EIVKEVSTYIK | |
Retrocopy | DGAVLIVAAGVGEFEAGISKNGQIREHARPAYTLGVKQLIVGVNKMDSTERP*SQERHGEIVKEVSTYIK |
Parental | KIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWK-VTRKDGNASGT-TLLEALDCILPPTRPTDKPLR |
KIGYNPDTVAFVPISG.NGDNMLEP.ANM.WF.GWK.VT.KD.NASGT.TLLEALDCILPPTR.TDKPL. | |
Retrocopy | KIGYNPDTVAFVPISG*NGDNMLEPNANMLWFQGWK<VTCKDDNASGT>TLLEALDCILPPTRATDKPLH |
Parental | LPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSV |
LPL.D.YKIGGIGTV.VG.VET.VLKPGMVVTFAPVNVTTEVK.VEMH.E.L.EALPGD.V..NVKN.S. | |
Retrocopy | LPLYDDYKIGGIGTVSVG*VETVVLKPGMVVTFAPVNVTTEVKFVEMHYEVLNEALPGDDVDLNVKNMSD |
Parental | KDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRS-GKK |
KDVR..NVAGDSKN.PPMEAAGFTAQVIILN.PGQIS.GYAPVLD.HTAHIACKFAELKEKI...S.GKK | |
Retrocopy | KDVRCDNVAGDSKNGPPMEAAGFTAQVIILNNPGQISSGYAPVLDGHTAHIACKFAELKEKIYCCS>GKK |
Parental | LEDGPKFLKSGDAAIVDMIPGKPMCVESFSD-YPPLGRFAVRDMRQTVA-VGVIKAVDKKAAGAGKVTKS |
..DG.K.LKSGDAAI.DMIPG..MCVESFSD.YPPL..FAV.DMRQ.VA..GVIK..DKKAAGAGKVTKS | |
Retrocopy | MKDGLKLLKSGDAAIIDMIPGNSMCVESFSD<YPPLSCFAVCDMRQRVA<LGVIKGMDKKAAGAGKVTKS |
Parental | AQK |
..K | |
Retrocopy | DRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |