RetrogeneDB ID: | retro_mluc_1392 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429830:3905858..3906806(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000015215 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000013537 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.44 % |
Parental protein coverage: | 68.4 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | NMITGTSQADCAVLIVAAGVGEFEAGISKNGQTR-EHALLAYTLGVKQLIVGVNKMDSTEPPYSQK-RYE |
N.ITGT.QAD.AVLIVAAGVGEFEAGISKNGQT..EHALL.YTL.VKQL.VGVNKM.STEP.YSQK.RYE | |
Retrocopy | NNITGTPQADYAVLIVAAGVGEFEAGISKNGQTLCEHALLTYTLSVKQLTVGVNKMGSTEPLYSQK<RYE |
Parental | EIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGNASGTT-LLEALDCILP |
.IVKEVSTYIKKIGYNPDTVA.V..SGW.G.N.L.PSAN..WFKGWKVT.KDGNASGT..LLEALD.ILP | |
Retrocopy | DIVKEVSTYIKKIGYNPDTVACVTFSGWKGNNTLKPSANTSWFKGWKVTCKDGNASGTS<LLEALDGILP |
Parental | PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-MVVTFAPVNVTTEVKSVEMHHEALSEALPGD |
PT.P.DKPL.LPLQDVYK.GGIGTVPV.RVE.GVLK.G..VVTFAPVNVTTE.KSVEMHHEALSEALPGD | |
Retrocopy | PTHPHDKPLHLPLQDVYKTGGIGTVPVDRVEAGVLKSG<QVVTFAPVNVTTEIKSVEMHHEALSEALPGD |
Parental | NVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELK |
NVGFNVKN.SVKDVR.GNVAGD.KN.PPMEAAGFTAQVIILNHPGQISA.YAPVL.CH.AHIACKFAELK | |
Retrocopy | NVGFNVKNMSVKDVRCGNVAGDNKNYPPMEAAGFTAQVIILNHPGQISAVYAPVLGCHPAHIACKFAELK |
Parental | EKIDRRSGKKLEDGPKFLKSGDAAIVDMIPGKPMCVESFS |
EKID..SGK.LEDG.KFLKSGDA.IV..IP.KP.C.ES.S | |
Retrocopy | EKIDHHSGKRLEDGLKFLKSGDAVIVNIIPSKPKCIESCS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |