RetrogeneDB ID: | retro_mluc_1853 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429930:1314753..1316030(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000013537 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 84.15 % |
Parental protein coverage: | 91.56 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | EKFEKEAAEMGKGSFKYAWVLD-KLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDF---IKNMI-T |
EKFEKEA.EMGKGSFK.AW.L..KLK.E.E.GITIDISLWKF.TS..YVTII.AP.H.DF....K.M... | |
Retrocopy | EKFEKEADEMGKGSFKNAWILE<KLKTECECGITIDISLWKFKTSRHYVTIIGAPAHTDFINNMKHMF>S |
Parental | GTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEV |
GTSQADCAVLIVAAGVGEFEAGISKNGQT.EHALLAYTLGVK.LIVGVNKMDSTEPPYSQKRY.EIVK.V | |
Retrocopy | GTSQADCAVLIVAAGVGEFEAGISKNGQTCEHALLAYTLGVKLLIVGVNKMDSTEPPYSQKRYKEIVKGV |
Parental | STYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGNASGTTLLE-ALDCILPPTRPTD |
STYIKKIGYNPDTVAFVPISGWNGDNMLEPSANM.WFKGWKVTRK.G.ASGTTLLE.ALDCILPPT...D | |
Retrocopy | STYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMSWFKGWKVTRKGGSASGTTLLE<ALDCILPPTGLID |
Parental | KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVK |
KPL.LPLQDVYKIGG.GTVPVG.VETGVLKPG.V.TFAPVNVTTEVKSVE.H.EALSEALPGD.VG..VK | |
Retrocopy | KPLHLPLQDVYKIGGVGTVPVG*VETGVLKPGLVITFAPVNVTTEVKSVETHQEALSEALPGDHVGLSVK |
Parental | NVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRS |
..S..D...GNVAGDSKNDPP.E.AGFTAQVIIL..PGQISAGYAPVLD.HTAHIAC.FAELKEK.D..S | |
Retrocopy | KGSIEDIPHGNVAGDSKNDPPGEGAGFTAQVIILSRPGQISAGYAPVLDGHTAHIACQFAELKEKTDCPS |
Parental | GKKLEDGPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTK |
GKKLEDGP.FLKSGDAAIV.M.PGKP.CV.SFSD.PP.G.FAVRDMRQTVAVGVIKAVDKKAAGAGKVTK | |
Retrocopy | GKKLEDGP*FLKSGDAAIVNMAPGKPTCVGSFSDCPPQGHFAVRDMRQTVAVGVIKAVDKKAAGAGKVTK |
Parental | SAQKAQKAK |
SAQKA.KAK | |
Retrocopy | SAQKAKKAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |