Parental gene:

ENSMLUG00000013537

Aliases:None
Description:None
Organism:Microbat (Myotis lucifugus)
Coordinates:GL429826:4600290..4603723(-)


>ENSMLUG00000013537
ATGGGAAAGGAAAAGACTCACATCAACATCGTCGTCATCGGACACGTAGATTCCGGCAAGTCCACCACTACCGGCCATCT
GATCTACAAATGTGGGGGCATCGACAAGAGAACCATCGAGAAATTCGAGAAGGAGGCTGCTGAGATGGGGAAGGGCTCCT
TCAAGTACGCCTGGGTCTTGGATAAACTGAAGGCCGAACGGGAGCGCGGTATCACCATTGACATCTCCCTGTGGAAATTC
GAGACCAGCAAGTATTATGTGACCATCATTGATGCCCCAGGGCACAGAGACTTCATCAAAAACATGATTACAGGCACATC
TCAGGCTGACTGTGCTGTCCTGATCGTTGCTGCTGGTGTTGGTGAATTTGAAGCTGGTATCTCCAAGAATGGACAGACCC
GTGAGCACGCCCTTCTGGCCTACACACTGGGTGTGAAACAGCTGATTGTTGGTGTTAACAAAATGGATTCCACTGAGCCA
CCCTACAGCCAGAAAAGATACGAGGAAATTGTTAAAGAAGTCAGCACCTACATTAAGAAAATTGGCTACAACCCTGACAC
AGTAGCATTTGTGCCAATTTCTGGTTGGAATGGTGACAACATGCTGGAGCCAAGTGCTAATATGCCTTGGTTCAAGGGAT
GGAAGGTCACCCGTAAAGATGGCAATGCCAGTGGAACCACGCTGCTTGAAGCTCTGGATTGCATCCTGCCACCAACTCGT
CCAACTGACAAGCCCCTGCGCCTGCCCCTCCAGGATGTCTACAAAATTGGTGGTATTGGAACTGTCCCTGTGGGCCGAGT
GGAGACTGGTGTTCTCAAGCCCGGCATGGTGGTCACCTTTGCTCCAGTCAATGTTACAACTGAAGTAAAGTCTGTTGAAA
TGCACCATGAAGCTTTGAGTGAAGCTCTTCCTGGGGACAATGTCGGCTTCAACGTCAAGAACGTGTCTGTCAAAGATGTT
CGCCGTGGCAATGTGGCTGGTGACAGCAAAAATGATCCACCAATGGAAGCAGCTGGCTTCACAGCTCAGGTGATTATCCT
GAACCACCCAGGCCAGATCAGTGCTGGATATGCACCTGTGCTGGATTGTCACACAGCTCACATTGCTTGCAAATTTGCTG
AGCTGAAGGAGAAGATTGATCGTCGTTCTGGGAAAAAGCTGGAAGATGGCCCCAAGTTTTTGAAATCTGGTGATGCTGCC
ATCGTTGATATGATTCCTGGCAAGCCCATGTGTGTTGAGAGCTTCTCTGACTACCCTCCTCTGGGCCGTTTCGCTGTTCG
TGACATGAGACAGACAGTTGCTGTGGGTGTCATCAAAGCAGTGGACAAGAAGGCAGCTGGAGCTGGCAAAGTCACCAAGT
CTGCCCAGAAGGCTCAGAAGGCTAAATGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014534 ortholog_one2many 3 retrogenes
retro_btau_114, retro_btau_115, retro_btau_192,
Canis familiaris ENSCAFG00000013249 possible_ortholog 1 retrogene
retro_cfam_1007,
Dipodomys ordii ENSDORG00000009629 possible_ortholog 1 retrogene
retro_dord_509,
Equus caballus ENSECAG00000020363 ortholog_one2many 2 retrogenes
retro_ecab_66, retro_ecab_93,
Equus caballus ENSECAG00000022260 possible_ortholog 1 retrogene
retro_ecab_802,
Erinaceus europaeus ENSEEUG00000000342 possible_ortholog 3 retrogenes
retro_eeur_407, retro_eeur_492, retro_eeur_625,
Felis catus ENSFCAG00000030977 ortholog_one2many 14 retrogenes
retro_fcat_1021, retro_fcat_1388, retro_fcat_1569, retro_fcat_1683, retro_fcat_1825, retro_fcat_184, retro_fcat_1915, retro_fcat_220, retro_fcat_221, retro_fcat_334, retro_fcat_515, retro_fcat_566, retro_fcat_688, retro_fcat_737,
Homo sapiens ENSG00000156508 ortholog_one2many 27 retrogenes
retro_hsap_1093, retro_hsap_1181, retro_hsap_1567, retro_hsap_1671, retro_hsap_190, retro_hsap_2302, retro_hsap_2455, retro_hsap_2637, retro_hsap_2712, retro_hsap_278, retro_hsap_283, retro_hsap_2896, retro_hsap_2920, retro_hsap_2967, retro_hsap_2983, retro_hsap_3239, retro_hsap_3291, retro_hsap_3314, retro_hsap_363, retro_hsap_3701, retro_hsap_3706, retro_hsap_3758, retro_hsap_3825, retro_hsap_3917, retro_hsap_4220, retro_hsap_4730, retro_hsap_989,
Loxodonta africana ENSLAFG00000028081 possible_ortholog 1 retrogene
retro_lafr_651,
Myotis lucifugus ENSMLUG00000016760 within_species_paralog 1 retrogene
retro_mluc_1250,
Monodelphis domestica ENSMODG00000018533 possible_ortholog 4 retrogenes
retro_mdom_1053, retro_mdom_1146, retro_mdom_311, retro_mdom_792,
Mustela putorius furo ENSMPUG00000003816 ortholog_many2many 6 retrogenes
retro_mputfur_1514, retro_mputfur_1643, retro_mputfur_220, retro_mputfur_502, retro_mputfur_844, retro_mputfur_862,
Mustela putorius furo ENSMPUG00000004271 ortholog_many2many 10 retrogenes
retro_mputfur_1179, retro_mputfur_1276, retro_mputfur_1351, retro_mputfur_1394, retro_mputfur_284, retro_mputfur_355, retro_mputfur_474, retro_mputfur_678, retro_mputfur_920, retro_mputfur_973,
Mus musculus ENSMUSG00000037742 possible_ortholog 15 retrogenes
retro_mmus_1349, retro_mmus_1518, retro_mmus_1667, retro_mmus_1783, retro_mmus_1816, retro_mmus_1849, retro_mmus_1850, retro_mmus_1864, retro_mmus_1909, retro_mmus_2363, retro_mmus_2583, retro_mmus_2902, retro_mmus_3249, retro_mmus_480, retro_mmus_483,
Oryctolagus cuniculus ENSOCUG00000008481 ortholog_one2many 3 retrogenes
retro_ocun_1102, retro_ocun_187, retro_ocun_71,
Ochotona princeps ENSOPRG00000016685 ortholog_one2many 6 retrogenes
retro_opri_1049, retro_opri_1076, retro_opri_1197, retro_opri_298, retro_opri_325, retro_opri_383,
Sus scrofa ENSSSCG00000004489 ortholog_one2many 4 retrogenes
retro_sscr_169, retro_sscr_492, retro_sscr_612, retro_sscr_758,
Ictidomys tridecemlineatus ENSSTOG00000007687 possible_ortholog 4 retrogenes
retro_itri_1509, retro_itri_1740, retro_itri_1816, retro_itri_195,
Tursiops truncatus ENSTTRG00000000114 ortholog_one2many 19 retrogenes
retro_ttru_1020, retro_ttru_1150, retro_ttru_1196, retro_ttru_1349, retro_ttru_1351, retro_ttru_1368, retro_ttru_1384, retro_ttru_1810, retro_ttru_1861, retro_ttru_1876, retro_ttru_384, retro_ttru_390, retro_ttru_401, retro_ttru_523, retro_ttru_664, retro_ttru_698, retro_ttru_844, retro_ttru_941, retro_ttru_998,
Drosophila melanogaster FBgn0000557 ortholog_many2many 1 retrogene
retro_dmel_9,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mluc_110 92.72 89.18
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2. retro_mluc_441 85.28 91.56
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3. retro_mluc_470 89.28 98.27
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4. retro_mluc_677 93.15 72.29
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5. retro_mluc_950 82.72 75.32
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6. retro_mluc_956 89.61 99.57
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7. retro_mluc_966 92.66 70.78
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8. retro_mluc_1252 78.32 73.81
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9. retro_mluc_1392 83.44 68.40
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10. retro_mluc_1430 90.98 83.33
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11. retro_mluc_1558 93.74 100.00
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12. retro_mluc_1628 78.46 69.91
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13. retro_mluc_1644 83.47 53.46
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14. retro_mluc_1853 84.15 91.56
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15. retro_mluc_1901 76.85 89.39
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16. retro_mluc_1910 79.40 99.57
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17. retro_mluc_2071 88.77 99.57
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18. retro_mluc_2148 77.25 54.98
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19. retro_mluc_2154 91.98 70.13
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20. retro_mluc_2277 87.62 69.48
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21. retro_mluc_2355 85.61 58.01
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22. retro_mluc_2358 88.84 98.27
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23. retro_mluc_2359 89.06 98.27
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24. retro_mluc_2391 90.15 70.13
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Download FASTA sequences of all ENSMLUG00000013537 retrocopies