RetrogeneDB ID: | retro_mluc_1485 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429847:2282711..2283901(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DNAJB | ||
Ensembl ID: | ENSMLUG00000016086 | ||
Aliases: | None | ||
Description: | Chaperone protein DnaJ B [Source:UniProtKB/TrEMBL;Acc:G1PTT5] |
Percent Identity: | 88.47 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MVKETTYYDVLGVKPNATQEELKKAYRKLAL-KYHPDKNPNEGEKFKQISQAYEVLSDAKKRDLYDKGGE |
MVKETTYYDVL.VKPNATQEELKK......L.KYHP.K.PNE.E.FK.ISQAY.VLSDA..R.LYDKG.E | |
Retrocopy | MVKETTYYDVLEVKPNATQEELKKGL*EAGLGKYHPGKYPNE-EEFKHISQAYKVLSDATQRGLYDKGEE |
Parental | QAIKEGGAGGGFGSPMDIFDMFFGGGGRMQRERRGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEG |
QAIKEGGAGGGFGSPM.IFDMFFGG.GRMQRERRGKN.VHQLS.TL.DLYNGA.RKLA.QKNVICDKCEG | |
Retrocopy | QAIKEGGAGGGFGSPMGIFDMFFGGKGRMQRERRGKNIVHQLSITLKDLYNGAARKLAPQKNVICDKCEG |
Parental | RGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILE |
RGG.KGAVECCP.C.G.GMQ.RIHQI..GMVQQIQSVCMECQGHGE.ISPKDRCKSCN.RKIV..KKILE | |
Retrocopy | RGGQKGAVECCPSCQGSGMQTRIHQIRLGMVQQIQSVCMECQGHGEWISPKDRCKSCNRRKIV*KKKILE |
Parental | VHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPIAT |
VHI.KGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFT..GEDLFM.MDIQLVEALCGFQKPIAT | |
Retrocopy | VHIAKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFT*QGEDLFMFMDIQLVEALCGFQKPIAT |
Parental | LDNRTIVITSHPGQIVKHGDI-KCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPE |
LDNRTI.ITSHPGQIVKHGDI..CVLNEGMPIY.RPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPE | |
Retrocopy | LDNRTIFITSHPGQIVKHGDI<QCVLNEGMPIYHRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPE |
Parental | RKEVEETDEMDQVELVDFDPNQERRRHYNGEAYEDDEHHPRGGVQCQTS |
RKE.EETDEMDQVELVDFDPNQER.RHYNGEAYEDDEHHPRGGVQCQTS | |
Retrocopy | RKEAEETDEMDQVELVDFDPNQERWRHYNGEAYEDDEHHPRGGVQCQTS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |