RetrogeneDB ID: | retro_mluc_1878 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429934:1789232..1789829(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DNAJB | ||
Ensembl ID: | ENSMLUG00000016086 | ||
Aliases: | None | ||
Description: | Chaperone protein DnaJ B [Source:UniProtKB/TrEMBL;Acc:G1PTT5] |
Percent Identity: | 78.5 % |
Parental protein coverage: | 50.38 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | NVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRK |
...CDK..GRG.KKGAVEC.PNCRGTGMQ.RIHQI.PGMVQ..QSVCM.CQGH.E.I.PK.RCK..NGRK | |
Retrocopy | SMVCDKYKGRGSKKGAVECHPNCRGTGMQMRIHQI*PGMVQPVQSVCMKCQGHEE*ICPKGRCKRGNGRK |
Parental | IVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEAL |
IV.EK.ILEVHIDKGMK.G.KITF.GEGDQEP.LEPGD.IIVL.QKDHAVFT..GEDLFM.M.IQLV..L | |
Retrocopy | IV*EK-ILEVHIDKGMKGGHKITFCGEGDQEPSLEPGDSIIVLGQKDHAVFTPPGEDLFMSMNIQLVKEL |
Parental | CGFQKPIATLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPE |
C.FQKPIAT.DNRTIVITSHPGQ..KHG.IKCVLNEGMPIYRRP...G.LIIEF..NFPE | |
Retrocopy | CNFQKPIATFDNRTIVITSHPGQSGKHGYIKCVLNEGMPIYRRPHTNGHLIIEFWANFPE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |