RetrogeneDB ID: | retro_shar_62 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL849547.1:1..736(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSHAG00000000010 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ACTB | ||
Ensembl ID: | ENSSHAG00000012694 | ||
Aliases: | None | ||
Description: | actin, beta [Source:HGNC Symbol;Acc:132] |
Percent Identity: | 97.54 % |
Parental protein coverage: | 65.07 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT |
MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYE.YALPHAILRLDLAGRDLTDYLMKILTERGYSFT | |
Retrocopy | MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEVYALPHAILRLDLAGRDLTDYLMKILTERGYSFT |
Parental | TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMES |
TTAEREIV.DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMES | |
Retrocopy | TTAEREIVHDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMES |
Parental | CGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI |
CGIHETTFNSIMKCDVDIRKDLYANTVLS.GTTMYPGI.DRMQKEITALAPSTMKIKIIAPPERKYSVWI | |
Retrocopy | CGIHETTFNSIMKCDVDIRKDLYANTVLSAGTTMYPGIVDRMQKEITALAPSTMKIKIIAPPERKYSVWI |
Parental | GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF |
GGSIL.SLSTFQQMWISKQEYDESGPSIVHRK.F | |
Retrocopy | GGSILGSLSTFQQMWISKQEYDESGPSIVHRKYF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |